| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2043 |
|---|
| Symbol | |
|---|
| ID | 3625558 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 2580293 |
|---|
| End bp | 2581405 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637700921 |
|---|
| Product | transposase |
|---|
| Protein accession | YP_305557 |
|---|
| Protein GI | 73669542 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0675] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.087211 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.244149 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAAG CGTTCAAATT TAGACTCTAT CCTACAACTA CGCAGTCTGT TCAATTGAAT
CAGCATATAG GTAGCTGTAG ATTTGTCTAC AATTGGGCGT TGGATCAAAA AATTAAAACT
TACGAACAAA CAGGAAAATC TATTTCCAGA TTTGACTTAA ACAAAAAGAT TCCTGTCTTG
AAAGCTTCTA ATGAATGGTT GGGAAAAGTA AACTCACAGT CATTACAAGG AATGACTAAG
CAGGTAGAAT CTGCTTTCAC CAGATTTTTC AGAGAAAAGA ATGGATTTCC TAAGTTTAAA
TCAAAGAAAA ATCCAATTCA ATCTTTTCCT ATACCTCAAC ACTATTCTGT GAATTTTGAA
AACAACACAG TTAAGCTTCC AAAAATCGAA CCGATTAAAG CAGTTCTTCA CCGAAAGTTT
GAAGGCGAGC TTAAAACAGC TACAGTATCA AGGTTTTGTA AAGGGAATTA CTACATTAGT
ATCCTTGTTG AAGACGGAAA AGAACTTTCA GCAAAGCAAC CTTTCACAGA ATCAACTACC
GTAGGAATAG ATGTAGGTAT CAAAGATTTT GCTATACTCT CTACAGGTGA AAAAATATCG
AATCCTATGT ATCTTAAAAA CTCCCTCAAG AGACTTAAAG TACTTCAGAA AAGAGTTTCA
AGGAAACAAA AAGGTTCAAA GAACAGAGCA AAAGCCAAAA AGAGGGTTGC TGTACTCCAT
GAGAAAATAA GCAATCAGAG ACATGATTTC CAGAACAAAC TCTCTTTTAA ACTTATAAGC
GAAAACCAAG CTATAGCTCT GGAAACTCTG AACGTTAAAG GAATGGTTAA GAATCACCAC
TTATCACAGT CTATAAGTGA TTCTGCATGG AGTAGCTTTG TTACAAAATT AGAATACAAA
GCGGCATGGT TCGGAAAAAC CACCCTGAGA ATTGGACAGT TTGAGCCATC TTCTAAGCTT
TGTAATGTCT GCGGATATCA TAATTCAGAT TTGACATTAA AAGATAGAGA ATGGACTTGT
CCAGACTGTA AAACAAAACA TGATAGAGAT ATAAATGCCG CTATCAATAT CAAGAAATTC
GTTCTCATAG ATCAAAATCT AATTGGGTTG TAA
|
|---|
| Protein sequence | MMKAFKFRLY PTTTQSVQLN QHIGSCRFVY NWALDQKIKT YEQTGKSISR FDLNKKIPVL
KASNEWLGKV NSQSLQGMTK QVESAFTRFF REKNGFPKFK SKKNPIQSFP IPQHYSVNFE
NNTVKLPKIE PIKAVLHRKF EGELKTATVS RFCKGNYYIS ILVEDGKELS AKQPFTESTT
VGIDVGIKDF AILSTGEKIS NPMYLKNSLK RLKVLQKRVS RKQKGSKNRA KAKKRVAVLH
EKISNQRHDF QNKLSFKLIS ENQAIALETL NVKGMVKNHH LSQSISDSAW SSFVTKLEYK
AAWFGKTTLR IGQFEPSSKL CNVCGYHNSD LTLKDREWTC PDCKTKHDRD INAAINIKKF
VLIDQNLIGL
|
|---|
| |