| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2042 |
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| Symbol | |
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| ID | 3625557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 2579156 |
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| End bp | 2579905 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637700920 |
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| Product | glycerol uptake facilitator, MIP channel |
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| Protein accession | YP_305556 |
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| Protein GI | 73669541 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.439233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.219403 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGTAC CAAACCTCAT GAAACGTGCG CTTGCGGAAC TAGTCGGGAC TTATGTCCTG
GTGTTCCTGG GTACGGGTTC GGTGATAACA ACCGTACTTC TTATGGAGGG CTGGGAGGCT
TTTCCCGGAA ACCAGTTTTA CATAGGGATT GACATTGCGG CCTGGTTTGC CATAGGAATG
TCTTTTGCAA TTGCAATCAC CTCCATGATC TATGCTTTCG GCCACATTTC AGGTACCCAC
ATCAACCCTG CGGTAAGTCT TGCTCTCTGG GCCACAGGCC GCTTTCCCAC AAAAGACCTC
CCTGCGTATA TTATCTCCCA GCTTATAGGT GCAAGCCTTG CGTCCTTTAC GCTTGTAGCG
ATTCTGGGAA TGAGGGCTGT TGATGCAGGT CTAGGGGCCA CGTCCATGTT CTACGGAGTC
GGTTATGGGC AGGCAATCTT CTGCGAAGCT GTATGTACCT TTTTCCTTAT GCTTACCATT
ATGGGTACAG CCGTGGACCG AAGGGCTCCC CCTGGATTTG CTGGGCTTGC AATAGGGCTT
GTGGTAGCGG CGGATGTGAT TGTTGTAGGC AACATTACAG GTTCTTCTCT GAACCCAGCC
CGCACCTTCG GCCCTTATCT TGCTGAATCC TTGCTGGGTG GAGCTAACCT CTGGGCTCAG
TTCCCGATTT ATATCATAGG CCCCATAGCG GGAGCACTGG TTGCAGCGTT CCTTTATGAT
TTTATAGCTG AACCAAAAAA GGCAGATTAA
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| Protein sequence | MTVPNLMKRA LAELVGTYVL VFLGTGSVIT TVLLMEGWEA FPGNQFYIGI DIAAWFAIGM
SFAIAITSMI YAFGHISGTH INPAVSLALW ATGRFPTKDL PAYIISQLIG ASLASFTLVA
ILGMRAVDAG LGATSMFYGV GYGQAIFCEA VCTFFLMLTI MGTAVDRRAP PGFAGLAIGL
VVAADVIVVG NITGSSLNPA RTFGPYLAES LLGGANLWAQ FPIYIIGPIA GALVAAFLYD
FIAEPKKAD
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