| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2039 |
|---|
| Symbol | |
|---|
| ID | 3625554 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 2574867 |
|---|
| End bp | 2575364 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637700917 |
|---|
| Product | pyruvoyl-dependent arginine decarboxylase |
|---|
| Protein accession | YP_305553 |
|---|
| Protein GI | 73669538 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1945] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00286] arginine decarboxylase, pyruvoyl-dependent |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0696775 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.231662 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTACAA AATTAATTCC TAGAAAAGTA TTTTTTACAA GTGGAGTTGG CACACACCCT
GAAAATCTTG AATCATTTGA AGTTGCACTC AGGGATGCAG GTATTGAGAA ATTTAATCTT
GTAACTGTAA GTTCTATCCT GCCCCCTGAA TGTGAGATTG TATCCAGAAA GGAAGGGCTT
GAAGAGTTAA GTCCCGGAGA GATTGTATTT TGCGTAATGT CCAGGATTTC TTCCAATGAA
CCAAGAAGGA CGCTCAGTAC ATCGGTTGGT TGTGCACTCC CGCAAAGCAT AAACAGGCAC
GGTTACATAT CAGAATATCA TGCCTATGGA GAAACCGCTC AGGACGTTGG GGAACATTCA
GAGAAACTTG CAAGAAGCAT GTACAGCACC TGGACAAATG AATCTCCTCT CAGGACACTC
AGTTTTCCCA GGTCATCTTC TGTAGATGAA CATGGAAACT GGATGACCGT GATATCCGCA
GCAGTCTTCA CTATCTGA
|
|---|
| Protein sequence | MITKLIPRKV FFTSGVGTHP ENLESFEVAL RDAGIEKFNL VTVSSILPPE CEIVSRKEGL
EELSPGEIVF CVMSRISSNE PRRTLSTSVG CALPQSINRH GYISEYHAYG ETAQDVGEHS
EKLARSMYST WTNESPLRTL SFPRSSSVDE HGNWMTVISA AVFTI
|
|---|
| |