| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2038 |
|---|
| Symbol | |
|---|
| ID | 3625553 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 2573528 |
|---|
| End bp | 2574565 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637700916 |
|---|
| Product | putative deoxyhypusine synthase |
|---|
| Protein accession | YP_305552 |
|---|
| Protein GI | 73669537 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1899] Deoxyhypusine synthase |
|---|
| TIGRFAM ID | [TIGR00321] deoxyhypusine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.1291 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.264826 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATCTTA ATGTGCTCAC AGATAACCCA ACCGTTCCGA TAGATGTAAA GGACAGGTCT
ATAAGCGAAT TGATGGAAGG AATGCTTAAG ACAGGCTTCC AGGGAAGAAA GCTGGCCGAA
TCTGTCCAGG CATGGCACAA CATGCTAAAA GAAAAGAATG TGACCGTGCT TATGGGCCTG
TCAGGAGCTA TGGTCCCTGC TGGCATGCGT AGGGTTATTT CCTATATGAT CCGGGAGAGG
ATGATAGACT GCCTTGTGAG CACAGGAGCA AATCTGTTCC ATGATTCACA CGAAGCTCTC
GGCAAGAAAC ATTATGTGGG TTCACATCTG GTTGACGATG AAGACCTCTT TGAGCACGGC
GTTGACAGGA TCTATGACGT TTTTGCAGTT GAAGAGGAGT TCAGAACCGC GGATAACCTG
ATTGCAGATT TTGCAGAAAA AATTGGAGAA ATTTCCTGTT CCTCAAGGGA ATTCATGTAC
CTGCTCGGAA AAGAACTGGA AAGGCGCGGA GCGGCCGAGG ATTCTATAGT CGTAAGTGCA
TACAGGCACA ATATTCCCAT CTTCGTTCCT GCACTTTCGG ACAGTTCAAT AGGAATCGGG
CTAACCATTG CAAGAAGAAG AGGATTGAAA CTTGATATTG ACCAGATAAA AGACGTTGAT
GAGGTCACTC AGATTGTAGA AAAATCAGGG AAAACAGGAG TTGTCTACAT TGGAGGTGGA
GTCCCTAAGA ATTTTATCCA GCAGACCGAA GTAATAGCTT CTATTCTTGG AATACAAACC
GGAGGGCATG ATTATGCAAT TCAGTACACT ACTGATGCTC CTCACTGGGG AGGACTTTCA
GGCTGCACTT TCGATGAAGC CGTTTCCTGG GGAAAAATTG CAGCTCAGGC AAAAAAAGTG
CAGGTCTTCG TGGATGCTAC TATTGCTCTC CCTATTGTAG CCCATGCACT TCATGAAAAA
TGCCGCGAAC TGAAGCGGAA TGCCCCGATT TTTAACTGGG AAGGGCCTGA AGGGCTTGAT
ATTGATTATA GAGAGTAA
|
|---|
| Protein sequence | MHLNVLTDNP TVPIDVKDRS ISELMEGMLK TGFQGRKLAE SVQAWHNMLK EKNVTVLMGL
SGAMVPAGMR RVISYMIRER MIDCLVSTGA NLFHDSHEAL GKKHYVGSHL VDDEDLFEHG
VDRIYDVFAV EEEFRTADNL IADFAEKIGE ISCSSREFMY LLGKELERRG AAEDSIVVSA
YRHNIPIFVP ALSDSSIGIG LTIARRRGLK LDIDQIKDVD EVTQIVEKSG KTGVVYIGGG
VPKNFIQQTE VIASILGIQT GGHDYAIQYT TDAPHWGGLS GCTFDEAVSW GKIAAQAKKV
QVFVDATIAL PIVAHALHEK CRELKRNAPI FNWEGPEGLD IDYRE
|
|---|
| |