| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2030 |
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| Symbol | |
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| ID | 3627847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 2564344 |
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| End bp | 2565246 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637700908 |
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| Product | ABC transporter, permease protein |
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| Protein accession | YP_305544 |
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| Protein GI | 73669529 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | [TIGR02790] nickel ABC transporter, permease subunit NikC |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0884139 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.749678 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGAAA ATATAAAAAT GGCTGAAAAA CTTTCTATGA ATAAAAAAAG GCTAAGTCTA
TGGCTAAGTC TATGGGAGTT TAAAAAAAAC AAACTTGCGC TCTTTGGCAT TTTGTTTATT
GCTATCCTAT GTTTTCTGGC CCTATTTGCT CCCTATATCT CTCCAAATGA TCCTTTTGTC
CAGAAAATTG ACGACCAATT TCTTGGCCCC TGTCATGAAT ACCCTTTAGG AACTGATGAA
TTTGGACGCT GCATCTTTTC AAGAATAATT TATGGCACAC GTATCTCTCT TGGCATTGGA
ATTCTCGTTG TTGCAGCTAC ATCCATTGCA GGTACCTCTC TTGGGTTGCT TTCAGGGTAC
AAAGGAGGCC TGTTTGATGA AATCCTTATG AGAGGTGTAG ACGTAATACT GGCTTTTCCC
AATATTATTC TTGCCCTTAT GATAGCAGGA CTGCTGGGAC CTGGGTTTTT AAGTGTCGTC
CTTTCCCTTT CCCTTACTCA GTGGCCTGTT TATGCAAGGC TTGTACGTGG ACAGGTTCTC
TCTTTGAAAA AGAGAGATTT TGTGGAAGCG ACAAGGGCTC TTAGACCCTC AAATTTCTAC
ATCATGCGAA AACATATACT TCCAAACTGC ATGGAACCTG TAATCGTTCT TGGAACTCTT
GAGATTGCCC ATGTAATAAT CTTTGCCTCT GCTCTGAGTT TTCTAGGACT TGGAATCCAG
CCTCCTACGC CTGAATGGGG CTCTATGCTC AAATCTGGGA TTCCCTACCT ACTCACATAT
CCTTACCTTT GTTTTATTCC AGGTCTCATG ATTATGCTTA CAGTTTTTGC TTTCAATTTT
GCAGCAGACG GATTAAGAGC CGGCTTGGGA CAGTCTGCTA AACAGGAGGT GCTGGATAGA
TGA
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| Protein sequence | MIENIKMAEK LSMNKKRLSL WLSLWEFKKN KLALFGILFI AILCFLALFA PYISPNDPFV
QKIDDQFLGP CHEYPLGTDE FGRCIFSRII YGTRISLGIG ILVVAATSIA GTSLGLLSGY
KGGLFDEILM RGVDVILAFP NIILALMIAG LLGPGFLSVV LSLSLTQWPV YARLVRGQVL
SLKKRDFVEA TRALRPSNFY IMRKHILPNC MEPVIVLGTL EIAHVIIFAS ALSFLGLGIQ
PPTPEWGSML KSGIPYLLTY PYLCFIPGLM IMLTVFAFNF AADGLRAGLG QSAKQEVLDR
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