| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2028 |
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| Symbol | |
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| ID | 3627845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 2562582 |
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| End bp | 2563292 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637700906 |
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| Product | ABC transporter, ATP-binding protein |
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| Protein accession | YP_305542 |
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| Protein GI | 73669527 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase
[COG4608] ABC-type oligopeptide transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.97327 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATTGT TAGAAGTGAA AAATCTGAAA AAGCATTATT ATTCCGGGCT TTTCCAGATT
CAGGTTAACA AGGCTGTAGA CGGGGTCAGT TTTAGGATAG AAAAAGGGAA AACTCTAGGT
CTTGTTGGAA AAAGTGGTTG CGGAAAATCC ACACTTGGAA GAACAGTGTT GAGATTGCTT
GAACCGACAG AAGGTAGCAT TATCTTTGAT GGTCAGGACA TTTCAGGACT TAAAGGCCAC
TCTTTAAAAT ACCTGGGAAC CAGGATGCAA ATTATATTTC AAAACCCTAA ATCATGCTTG
AACCCAAAGA TGAAAGTTTA TGATATAATT GCAGAACCTT TAAAGCTTCA CAGGCTTTGC
GCTAAAGACA AAGAATTGGA GAGGGTAAAG GAACTTATTG AAATTGTATC CCTTAATGAA
GAGCTTCTTT TTCGCTATCC CAAAGAGCTA AGTGGAGGTC AGCTTCAGAG AATTGCAATT
GCAAGAGTCC TTAGCATGAA ACCAGAATTA ATAGTAGCGG ATGAGCCTAC TTCGATGCTA
GATCCACTTG TCCAGGCTCA AATTCTTTCG CTTCTTAAGG GACTGCAAAT CAAGTTCAAG
ATAAGTTTTC TGTTTATCTC CCACGATATT AAGGTTGTTG AATGGATGAG TGACGAGATT
GCCTTTATGG AGAAAGGAAA AATTGTTAAT TTTAAAATAG TGTCACGTTA A
|
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| Protein sequence | MALLEVKNLK KHYYSGLFQI QVNKAVDGVS FRIEKGKTLG LVGKSGCGKS TLGRTVLRLL
EPTEGSIIFD GQDISGLKGH SLKYLGTRMQ IIFQNPKSCL NPKMKVYDII AEPLKLHRLC
AKDKELERVK ELIEIVSLNE ELLFRYPKEL SGGQLQRIAI ARVLSMKPEL IVADEPTSML
DPLVQAQILS LLKGLQIKFK ISFLFISHDI KVVEWMSDEI AFMEKGKIVN FKIVSR
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