| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2023 |
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| Symbol | |
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| ID | 3627840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 2556540 |
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| End bp | 2557757 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637700901 |
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| Product | glucose-1-phosphate thymidylyltransferase |
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| Protein accession | YP_305537 |
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| Protein GI | 73669522 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
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| TIGRFAM ID | [TIGR01208] glucose-1-phosphate thymidylylransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.562906 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCTA TTATCCTTGC AGCCGGAGAA GGGCTGCGCT GCAGGCCTCT TACTCTAACT
CGTTCAAAAG TAATGCTTCC CATAGCCAAC AGGCCTATTT TAGAGCATGT AATAGGTTCG
CTTGAAAAAA ATGGAATAAC TGACATTATA TTGATTGTTG GATATAAAAA AGAACGCATA
ATGGACTATT TCGAGGACGG GCTAAATTTT GGAGTGAAAA TAAAATATGT CGAACAGAAA
GCTCAGCTAG GTACTGCACA TGCAATTGAG CAGGCAAAAA AATGGATTGA ACCCGAGGAC
TCGGAATTTC TCGTGCTCAA TGGAGACAAC CTGGTGGAAC CGAAAACTAT AGCGGACCTT
CTGAATAATT ATGAAGGAGA TGCAAGCCTT CTAACTGTTC AGATGGAAGA GACTGCTGGC
TATGGAGTAG TTCTGAAAGA AAAAAAGAGA GTCACGAGAA TTCTGGAAAA AAGACCTGGA
GACCTGAGCC GTATTGTAAA TACCGGAATT TATATTTTTA CGCCGCAGGT CTTTGAAACC
ATCGAAAAAA CCCCGATATC CGAAAACGGT GAATATGCAA TAACCGATAC CCTCCAGCTT
ATGATTGACG AAGGAAAAAT CGTTACTTCT GTTTCTACCA AATCAAAATG GATTGACGCT
GTTCATTCCT GGGATTTATT AAAAGCTAAT GCCATAGTCT TAAATTCAGC CAGGAACCTG
AAGCTTGAAG GAGAAGTTGA AGAGGGAGTT TTCCTCAGTG GAAAGGTGGC AGTAGGAAAG
AATACCAGGA TTCGTTCAGG AACTTACATT GTAGGCCCTG TGGTCATAGG GGAAAATTGT
GATATCGGTC CCAATGTAGT TATTCTGCCC TCCACAACAA TAGGAGACAA TGTATCGATC
AGGTCATTTA CCGAAATACA GAACAGTATA ATAATGAATG ACTGCAGGAT ATACTCTCAT
GGGCGTATCT CGAATTCCAT AATTGGAAGC AACAATACAA TTGGCTCAGG TTTCTTTGTT
GAAGAAAAAG AAGGTCTATC GATCATTATG AATGGAACGA TTCATCGAGC TCCCAGACTC
GGCACCATCT TCGGAGACGA CAACCGTATT GGGAATAGCG TACTTGTAAA GGCCGGAGTA
ACAATAGCTG TTGACTGCCA GGTTGAATCT GGGAATACCA TATATAGGGA TCTGTCCCGT
CATTCGGTTG TTCTTTAA
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| Protein sequence | MKAIILAAGE GLRCRPLTLT RSKVMLPIAN RPILEHVIGS LEKNGITDII LIVGYKKERI
MDYFEDGLNF GVKIKYVEQK AQLGTAHAIE QAKKWIEPED SEFLVLNGDN LVEPKTIADL
LNNYEGDASL LTVQMEETAG YGVVLKEKKR VTRILEKRPG DLSRIVNTGI YIFTPQVFET
IEKTPISENG EYAITDTLQL MIDEGKIVTS VSTKSKWIDA VHSWDLLKAN AIVLNSARNL
KLEGEVEEGV FLSGKVAVGK NTRIRSGTYI VGPVVIGENC DIGPNVVILP STTIGDNVSI
RSFTEIQNSI IMNDCRIYSH GRISNSIIGS NNTIGSGFFV EEKEGLSIIM NGTIHRAPRL
GTIFGDDNRI GNSVLVKAGV TIAVDCQVES GNTIYRDLSR HSVVL
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