Gene Mbar_A2019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2019 
Symbol 
ID3627836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2549364 
End bp2550860 
Gene Length1497 bp 
Protein Length498 aa 
Translation table11 
GC content37% 
IMG OID637700897 
Producthypothetical protein 
Protein accessionYP_305533 
Protein GI73669518 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.387729 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCAT TGTTAACACG AGAATTAGGA ATTTTTTTAT TGGTAGGTTT CTTCCTTCTT 
GCAAGTGTTC CTACAACTTT ATGCGCAACT AGCTCATCAA TAGTATACGT TGCTGGAGAT
GGCACTGGAA AATATAATTG TGATGGAAAA GATGATCAAG TGCAGATCAA TCAAGCCCTG
AAGCTTGTGG CAAACAATCC TACAAAATAT ACTACTGTAC ACCTCAAAGG ACCTTTTACA
TACGTTATTG ACGATACTAT TTTAATCGGT AGTAATACTA TTCTTGAAGG AGATTCGAGT
GCTGTGATCA AACTTGCTAA CAATGCAGGT TGGGTTGCAA TGAAACCCTT GATCAAGCAG
ATGAGTAGTT CTGGAAATAG TAATATTGTA GTAAGAGGTT TCGAGATTAA TGGAAACCGT
AACGGTAATT CCAAAGTTTC TTTGGGTGAC GGATACTATA ATATGATGTA CTTCACGAAA
TGCAACAACG TGAAAATATA CAATATGTGT ATGCATGACG GTCACGGGGA TGGGCTGAGG
ATAAAATATG GAAAAAATAT TAAATTTTAT AAAAACAGGA TATACAAGCT CGGGCATGAT
GGTCTTTTTA CAATTCAGTG TAAGAACGTA AAGGCCTGGA AAAACAGGAT AAGCTGCAGG
ACTAACAGCG GTCTTAGAAT CTGGAACTCA AACCATGTAA AAATCTACGG TAATATAATT
GATTCTTTCT ACCACTGGAG TGCAGGCGGG CCAGGCATTC AGATCGAAAA AGGAGGGACT
GGTACGGGTC TTATGACTGA TATTAGTATC TACGATAATA TTATCCATAA CACCTATGGT
CCTGGAATCT GGATTTTCAA TTATGATACC AATCCTGCTA CTAAAAATTA TGGAAAAAAT
GTTCTTATTC ACAATAATGT CTTTTACAGC ACAGGCACCA ATCCTAGCAT TACCTGGGTT
GGCGGTATTG TAATTAGTGG ATTCCGCAAC ACTTATATTG AAAACAATGT CTTTGATGGC
ATATATCATG TGGCTATTGC CAATTTATAT CCAGAAAATT ATCACCCAAG TTACACGGCA
TCTGTATATG CAACAATTGC CCGCAACAAT ATAATCGTAA ACACCCTGAA ACGTAAAAAG
AGTCCAAGTG GAACAGGGTA TGGTGTGATA AATTATCTCG CCAGTAAAAA CCATAAAATA
TATCTGCAAT ATAACTGCTT CTACAAAAAC GCAGTAGGAA ATTATAAAAG TTGCACTTCG
TTAAAGGACA TCCGTGTAAA TCCACTATTT GCGAGCCAGA CGAAACATGA TTACCATCTA
AAATCAACAA CTGGAAGATG GAATGGAAAA AGATGGGTTA AAGACACAGT AATCTCTCCC
TGTATTGACA CCGGACATCC GTCTTGGAGC TATTCTAATG AACCGAAACC CAACGGAAAA
AGGATTAACA TGGGCACGTA CGGAAATACA AAATATGCAT CAAAATCAAA GAGTTAA
 
Protein sequence
MTPLLTRELG IFLLVGFFLL ASVPTTLCAT SSSIVYVAGD GTGKYNCDGK DDQVQINQAL 
KLVANNPTKY TTVHLKGPFT YVIDDTILIG SNTILEGDSS AVIKLANNAG WVAMKPLIKQ
MSSSGNSNIV VRGFEINGNR NGNSKVSLGD GYYNMMYFTK CNNVKIYNMC MHDGHGDGLR
IKYGKNIKFY KNRIYKLGHD GLFTIQCKNV KAWKNRISCR TNSGLRIWNS NHVKIYGNII
DSFYHWSAGG PGIQIEKGGT GTGLMTDISI YDNIIHNTYG PGIWIFNYDT NPATKNYGKN
VLIHNNVFYS TGTNPSITWV GGIVISGFRN TYIENNVFDG IYHVAIANLY PENYHPSYTA
SVYATIARNN IIVNTLKRKK SPSGTGYGVI NYLASKNHKI YLQYNCFYKN AVGNYKSCTS
LKDIRVNPLF ASQTKHDYHL KSTTGRWNGK RWVKDTVISP CIDTGHPSWS YSNEPKPNGK
RINMGTYGNT KYASKSKS