Gene Mbar_A2017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2017 
Symbol 
ID3627834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2546800 
End bp2547255 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content43% 
IMG OID637700895 
Producthypothetical protein 
Protein accessionYP_305531 
Protein GI73669516 
COG category[S] Function unknown 
COG ID[COG1238] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0715199 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGAAG CTTTGAGTTC CTTTATTACC GACTACGGTT ACCTGAACCT CTTTGTCCTG 
AGCTTCCTGG CTTCCACGGT TTTGCCGTTA GGATCGGAAG CGCTGGTAGT AGCTCTCATT
TATCAGGGCT TTAATCCTTT TGCTGTTGTT TTGGTAGCGA CTTCAGGCAA TTATCTCGGA
TCGTGCACAA CGTACTATCT CGGGCTTAAA GGGCGTCCGG TACTTGAGAA GTTCCTTTCT
CCTTCTCCTG AGAAGCTTGA GAAAAGTGAA AAGCTCTTTA AAAAATATGG TCTTTACACC
CTTCTTTTTA CCTGGGTGCC AGGTATCGGA GACGCGATTA CCATGGTTGC AGGACTTATG
CAGCTTTCTT TCCGATATTT TTCTATTCTG GTTTTTCTTG GGAAATTCGG GCGTTATTTT
GCTATTGCTT ATATAACAGT TCTTTTTAGC AATTGA
 
Protein sequence
MLEALSSFIT DYGYLNLFVL SFLASTVLPL GSEALVVALI YQGFNPFAVV LVATSGNYLG 
SCTTYYLGLK GRPVLEKFLS PSPEKLEKSE KLFKKYGLYT LLFTWVPGIG DAITMVAGLM
QLSFRYFSIL VFLGKFGRYF AIAYITVLFS N