Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2010 |
Symbol | |
ID | 3627946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 2535656 |
End bp | 2536486 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637700888 |
Product | hypothetical protein |
Protein accession | YP_305524 |
Protein GI | 73669509 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0105521 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATATCCT CAAATCAATT AGACTTTATG ATAATGCTGT CTCTGATATT TTCAGTGCCA GCAGGCTATT ATATTTTTGT GCCGGAACCT CTTCGGCCCA AATACTATTA TGGAAACCTT GAGTCGCCTG GAATTTTGGA GATTCTACCT TATGTATCTT CGGCTGCATT TATCTTCATA CTTATGGATT CACAAAGAGA AATTTCAAAC CTCCTGGGTC TCAGTCCCTC TCTCAATTAT GATAGATATA TGTTGATGCT AGAAGGCACT AAAGTGAGTA TTTTCCAGAG CATAGCCAAT CCAACGCTGA CATACTTTTG CGGAGCAGTT TATCTGGTTG GATTTCCATT CCTTTTGATC TTTACATTTA TATTATTCCT GTTTAGCCAA GATGATGAGG CTCTTAAAGA GTATACAATT ACTTTTATAC TTATATATTT GATAGCCTAC GTTTTTTACA TATTTTTCCC AGTAAATGTG ACCGGACATG TATTGCCAGG AGTGATCCCT TTGCTATATC AATTGAATCC GGCCATCTTG GGGATAGTAA CTATCTGTAG TCCCCGTCTT AACAATTGCT TCCCAAGCCT GCATGCAGCA CTCTCGGTAA TGGCAACGAT GTTTATACTT TTTAAGACAG ATCTCAGGCG TTACAAGGTT TTTGCAGTAG GAACAACCAT TTTCATCCTT TTTTCAATAC TGTATCTTGG CATACACTGG ATTACGGATA TGATTGGTGG GATTATACTC GCTCTTGTTT CTTATTTCGT AGCTATTCGA ATTTTTAAAA AGAGGTTCAA GGATGAAAGT ACTCGTTTTT ATATGCGGTG A
|
Protein sequence | MISSNQLDFM IMLSLIFSVP AGYYIFVPEP LRPKYYYGNL ESPGILEILP YVSSAAFIFI LMDSQREISN LLGLSPSLNY DRYMLMLEGT KVSIFQSIAN PTLTYFCGAV YLVGFPFLLI FTFILFLFSQ DDEALKEYTI TFILIYLIAY VFYIFFPVNV TGHVLPGVIP LLYQLNPAIL GIVTICSPRL NNCFPSLHAA LSVMATMFIL FKTDLRRYKV FAVGTTIFIL FSILYLGIHW ITDMIGGIIL ALVSYFVAIR IFKKRFKDES TRFYMR
|
| |