Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2002 |
Symbol | |
ID | 3627938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 2525820 |
End bp | 2526284 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637700880 |
Product | hypothetical protein |
Protein accession | YP_305516 |
Protein GI | 73669501 |
COG category | [K] Transcription |
COG ID | [COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.584772 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGTAA AAGATGTCAT GAACCCGAAC GTTGTTTTCT GCAAGCCTGA TGATACAGTC CGGGAAACGG CAAGAATCCT GAAAGAAAAC AATGTGAGTG GAGCACCTGT CCTTGAAGGT GAAGAGCTTG TAGGAATTAT AAGTGAGGCG GACCTGCTAA AACTGCTGAT ACTCCCCGAA AAGGGGGAAC TCTGGCTTCC AAGTCCCTTT GAGGTTATAG AGGTTCCTAT CAGGGAACTT CTTGGCTGGG AAGAAACGAA GAAGATGCTC TCTGATGTGG GTTCCACAAA GATAGAAGAG ATTATGATAA GGAATGTGCA CACGATCTCT TCCGAGGCAT CGATTGAAGA GGCATCCGAG CATATGATAA GGCACAGGAT CAACAGGCTT CCTGTAACTG AGGACAACCG CGTGGTGGGA ATCATTACTC GCGGCGATAT TATCAAAGGT CTTGCAAAGC TCTGA
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Protein sequence | MKVKDVMNPN VVFCKPDDTV RETARILKEN NVSGAPVLEG EELVGIISEA DLLKLLILPE KGELWLPSPF EVIEVPIREL LGWEETKKML SDVGSTKIEE IMIRNVHTIS SEASIEEASE HMIRHRINRL PVTEDNRVVG IITRGDIIKG LAKL
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