Gene Mbar_A2002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2002 
Symbol 
ID3627938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2525820 
End bp2526284 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content47% 
IMG OID637700880 
Producthypothetical protein 
Protein accessionYP_305516 
Protein GI73669501 
COG category[K] Transcription 
COG ID[COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.584772 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTAA AAGATGTCAT GAACCCGAAC GTTGTTTTCT GCAAGCCTGA TGATACAGTC 
CGGGAAACGG CAAGAATCCT GAAAGAAAAC AATGTGAGTG GAGCACCTGT CCTTGAAGGT
GAAGAGCTTG TAGGAATTAT AAGTGAGGCG GACCTGCTAA AACTGCTGAT ACTCCCCGAA
AAGGGGGAAC TCTGGCTTCC AAGTCCCTTT GAGGTTATAG AGGTTCCTAT CAGGGAACTT
CTTGGCTGGG AAGAAACGAA GAAGATGCTC TCTGATGTGG GTTCCACAAA GATAGAAGAG
ATTATGATAA GGAATGTGCA CACGATCTCT TCCGAGGCAT CGATTGAAGA GGCATCCGAG
CATATGATAA GGCACAGGAT CAACAGGCTT CCTGTAACTG AGGACAACCG CGTGGTGGGA
ATCATTACTC GCGGCGATAT TATCAAAGGT CTTGCAAAGC TCTGA
 
Protein sequence
MKVKDVMNPN VVFCKPDDTV RETARILKEN NVSGAPVLEG EELVGIISEA DLLKLLILPE 
KGELWLPSPF EVIEVPIREL LGWEETKKML SDVGSTKIEE IMIRNVHTIS SEASIEEASE
HMIRHRINRL PVTEDNRVVG IITRGDIIKG LAKL