Gene Mbar_A2000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2000 
Symbol 
ID3627936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2523560 
End bp2523982 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content42% 
IMG OID637700878 
Producthypothetical protein 
Protein accessionYP_305514 
Protein GI73669499 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG3613] Nucleoside 2-deoxyribosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAGA AGAAGACAAT ATATCTTGCA GGCCCCCTCT TCAGCCATGC AGAACTTGAT 
TATAACCGTA AACTGAAGGA TTTACTGCTC AGGAAAGGCT TTTCGGTTTT TTTGCCCCAG
GAAGATGCAG AGGATACCAT AAACGAACGC GAAAAACTGA ACCAGGAGTG TATTTTCAAT
AAATGTGTAG AAGGTGTGGA CGGTTCTGAT ATTGTAGTTG CAGTCCTTGA TGGTGTAGAT
GTAGACTCAG GAACTGCCTG GGAGATAGGC TACGCTTATG CAAAGGAAAA GCCGGTTATC
GGGGTTCGAA CAGATTTTCG TTCTCTCTCC GACGGAATTG TTAACCTTAT GGTAGAGATG
GCTATAGTCT CCCTTGCAAA GAATGAAGAC GAACTGCTGA AAATAATAGA AAAATTCCGG
TAA
 
Protein sequence
MNKKKTIYLA GPLFSHAELD YNRKLKDLLL RKGFSVFLPQ EDAEDTINER EKLNQECIFN 
KCVEGVDGSD IVVAVLDGVD VDSGTAWEIG YAYAKEKPVI GVRTDFRSLS DGIVNLMVEM
AIVSLAKNED ELLKIIEKFR