Gene Mbar_A1983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1983 
Symbol 
ID3627958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2477118 
End bp2478005 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content45% 
IMG OID637700861 
Producthypothetical protein 
Protein accessionYP_305497 
Protein GI73669482 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGAAA GTAGCATGAC TTCCGACTCT CTTACAGCCC CTGTAGATTG GGTTAGATTC 
TGGGAAGACA ACTATGATGC CCGGTCTAAA ATTATGTTCA GGGACTATGA GCTCGATGAC
TGGAGTGAAA GGGCAGTGGA TTACTCGGAA TCCAGGCGGA CAAACAATTA CGAGTTCGGA
GAGTCAGTAT ACTCTACACT CGCTCTCCAT GGAGTTGTTT CTCCTCACTC AAGAGTTCTT
GAAGTTGGTG CAGGCCCGGG AACGTTTGTA ATCCCCTTCG CAAAGAAGGT TGATCATATA
ACTGCTATTG AGCCTTCAAA AGGAATGATC CGTATGATCT CTCAAAATGC TGTGGAAGCC
GGAGTGAATA ACTATGATAT TATCCCAAAA ATCTGGCAGG ATGTGAATAT TGAAGATTTC
AGGGAACGGT ATGACCTTAC TATCACCTCA ACCGTCATAT GGATGTTTCG TGACATTATG
ACCCAGATAA GCCGGATGGA AGAGGTAACA CAGGGACACT GCTGTGTGGT TGGTGGAGTA
GGCACAGAGC AGACATTTGA AGCCGAACTC TGGAAGAAAA TCATGGGCAA CACACCTCGT
CCCCAGTACC CGGAATACCC TTTGATCTAT AATCTCCTTT ACACATGTGG AAGAGTCCCT
TATGTTAGGT TTATTGATTA TACAAGTATA AGATCACCTG AGAACATGCT CAGGATGTAC
AGGGTTTTCT ACTCAATCTA TAAGGAGGTC ACACCTGAGA TTGAAGAAAT TATTCGAGAG
GCATTGTACC GTGACTCAGG AGAAGGGCCG TGTATCAGGA AATACCGCTC CGCTGTGATC
TGGTGGAATC CGGCTGTTCG AAGAAAAGAG TTGAAAGGTA TTGCCTGA
 
Protein sequence
MVESSMTSDS LTAPVDWVRF WEDNYDARSK IMFRDYELDD WSERAVDYSE SRRTNNYEFG 
ESVYSTLALH GVVSPHSRVL EVGAGPGTFV IPFAKKVDHI TAIEPSKGMI RMISQNAVEA
GVNNYDIIPK IWQDVNIEDF RERYDLTITS TVIWMFRDIM TQISRMEEVT QGHCCVVGGV
GTEQTFEAEL WKKIMGNTPR PQYPEYPLIY NLLYTCGRVP YVRFIDYTSI RSPENMLRMY
RVFYSIYKEV TPEIEEIIRE ALYRDSGEGP CIRKYRSAVI WWNPAVRRKE LKGIA