| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1980 |
|---|
| Symbol | |
|---|
| ID | 3627955 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 2474310 |
|---|
| End bp | 2475224 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637700858 |
|---|
| Product | oligopeptide ABC transporter, ATP-binding protein |
|---|
| Protein accession | YP_305494 |
|---|
| Protein GI | 73669479 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGAAG GAAGAGGCCT GACCAAGATA TTCGCTCCCA ATTCCCCAGG AAAAAACAGG
ATCATCGCTG TTGACGATGT AAATATCAGG ATCGAAGCAG GAGAAACCCT TACTCTTGTA
GGAGAAAGCG GATGCGGAAA GTCTACTCTC TCAAGACTGC TCCTCTTGCT TACTCCTCCA
ACACGGGGAG AGATATTCTT TGAGGGTCAG GCTCTTACAA GACTGAAAGG GAAAGAACTC
CGCTCTATCC GGAAAAAACT TCAGATTGTG CCTCAACAGC CTGAAAGCTC CCTGGATCCC
AGATGGACGA TAGCTTACTC AATCTGCGAA CCTTTCCGCA TACATCCTGA TTCGTTACAC
GGAAGGCAGA TGGATGAAGA GCTAAAAAGG CTTCTTAGGC TCGTTGGGCT CGAACCTGAG
CAGGCAGCCA GATATCCTCA CCAGCTCAGC GGTGGAGAAC TGCAACGCGC AGTTATTGCT
CGTGCTATCG CACTTGAGCC TTCACTTCTC ATATGTGACG AACCGACTTC AATGCTTGAT
GTTTCCACTC AGGCATCTAT TATACACCTC CTGAAAACAC TCCAGCAAGA CCTCGGATGT
GCCCTTCTCT TCATTACTCA CGACCAAGGG CTTGCACACG CTATTGGAGA CCGGACAGCT
GTAATGTTTG CCGGGCAGAT AGTAGAAGAG GGACAGGGTA TTCTGGATAG GCCATACCAC
CCATTTACTT GCAGAATCAC ATCTGTCTCT GATTCCGGTT CCTTACCACC ATCTGAACCT
CAAGGGACAA AGATTCCAGG TTCATGCGTA TATTATCAAT TCTGCCCGGA AAAGACAGAA
AAATGCCTTC ACAGCCCTGA AATGCTGGAA TATGGAGATA GATGGGTGCG TTGCCATAAC
TTTTCACCTG CTTAA
|
|---|
| Protein sequence | MIEGRGLTKI FAPNSPGKNR IIAVDDVNIR IEAGETLTLV GESGCGKSTL SRLLLLLTPP
TRGEIFFEGQ ALTRLKGKEL RSIRKKLQIV PQQPESSLDP RWTIAYSICE PFRIHPDSLH
GRQMDEELKR LLRLVGLEPE QAARYPHQLS GGELQRAVIA RAIALEPSLL ICDEPTSMLD
VSTQASIIHL LKTLQQDLGC ALLFITHDQG LAHAIGDRTA VMFAGQIVEE GQGILDRPYH
PFTCRITSVS DSGSLPPSEP QGTKIPGSCV YYQFCPEKTE KCLHSPEMLE YGDRWVRCHN
FSPA
|
|---|
| |