| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1979 |
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| Symbol | |
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| ID | 3627954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 2472499 |
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| End bp | 2474049 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637700857 |
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| Product | oligopeptide ABC transporter, solute-binding protein |
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| Protein accession | YP_305493 |
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| Protein GI | 73669478 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02294] nickel ABC transporter, periplasmic nickel-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGAA AAGAGGGAAT TCTTTTTATT TTGCTGGCTC TCGTTGTCTT GGGAGCAGGT
TGTACGGACA AAGAACAAAA AGGAGATAAT CAAACATTGT CCATCTCGGG TCAATGGAGT
CCCACCTCTA TTGATCCTCA CATATCGGGG ACTGTTCCTC AAAGGCTCGG GTACGTAGAA
ACTCTTGTAG GAGTTGATTA TGAAGGAAAG ATTATCTCAA ATCTTGCAAA ATCATGGGAA
GTCTCCAGTG ATGGAAAAAA ATGGACATTC AAATTGAGAG AGGGCGTTTT ATTCCATGAT
GGGACACCTT TCACAGCCGA AATAATGAAA AAATCTCTTG AAAGGTCCTT TATCCAGTCG
GCATCAACAT TCGGAAAAAT TCCTGTAACG TCGATTGAGG TTCCTGATAA CCTAACATTA
GTAATCAACC TCAATTCAAC TTTCCCTGCA CTTCCTGCTT ATCTTTCCAA AGGAGAAAGT
GCTGCTCTTG CCCCAGGATC TTATGATGCA AGCGGAAACG TCACAAAGCC TATCGGCACA
GGGCCTTTTA TCTTTGAATC CTGGAAACCG AACGAAGAAA TTGTTATCGT CAAGAATCCC
GATTACTGGG GACATGTTGC TTCAGTTGAT AAAGTGGTAT ACCGGGTAAT TCCTGAAGTA
CTTACAAGAA AGATGCTCCT TGACAGTAAG GATATTCAAA TAGCAATGAT TCTTTCGCCT
GATGTTGCCG ATAAATATAA CGAAAAGGCT GATTATACAG TCCTTGAAGA GCCGATCGCT
CGTGTAAGGA TGATAGCGTT CAATACGGAA AAGGAGCCCT TCAGCGATAA AAAGGTACGT
CAGGCTGTTA ATTACGCTAT AGATCGGGAA GCAATAGTGA ATTCTGTTCT TTACGGATAC
GGAACCACAG CATCAGGACT TTTTCCTCCT CAGTTTTACT GGGCAAACAA GGATATTGCC
CCTTATACTT ACGACGTGGA GATAGCAAAA ACACTCCTTG ATGAAGCAGG ATGGACCGAC
TCGGATGGTG ATGGGATCCG TGATAAAAAC GGCAAGCCTA TGAAGATTAC ATTAGTTACT
TATTCTGAAA GAGCAGAACT GCCGTCGATC GCTGAGGTGA TCCAGCAGCA GCTTAAGAAA
GTAGGCATAG AGACAGAACT TAAGGTCCTC AATACCGATG CCGCAAATAC CCAGAGGAAT
AAAGGAGATT TTGATATTTA CCTCGCAGGA AGGGGACTAT TTTTCGTACC TGATCCTGAT
GAGATAATGA TGACAGACTA TCATTCAAGT GGCACATCAA TCGACGGTTG GGGAGCATAT
CGCTGGCACA ACGACACTGT AGATCAGCTG ATTGAGCAGG CCCGAACCAC TTCCGATGAA
GCTGCCAGAA AAAAACTCTA TGATGAAGTT CAATCAATTG TTGTCGAAGA AGCGCCGGTT
GCGTATCTTA ACTACTACGT TAATATCGAC GTCACAACTT CGAACATAAA AGGATATCGT
CTCCATCCTA CAGAGTGCTC TTTCGACCTT CAGAACGTCT CAATTTCCTG A
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| Protein sequence | MKRKEGILFI LLALVVLGAG CTDKEQKGDN QTLSISGQWS PTSIDPHISG TVPQRLGYVE
TLVGVDYEGK IISNLAKSWE VSSDGKKWTF KLREGVLFHD GTPFTAEIMK KSLERSFIQS
ASTFGKIPVT SIEVPDNLTL VINLNSTFPA LPAYLSKGES AALAPGSYDA SGNVTKPIGT
GPFIFESWKP NEEIVIVKNP DYWGHVASVD KVVYRVIPEV LTRKMLLDSK DIQIAMILSP
DVADKYNEKA DYTVLEEPIA RVRMIAFNTE KEPFSDKKVR QAVNYAIDRE AIVNSVLYGY
GTTASGLFPP QFYWANKDIA PYTYDVEIAK TLLDEAGWTD SDGDGIRDKN GKPMKITLVT
YSERAELPSI AEVIQQQLKK VGIETELKVL NTDAANTQRN KGDFDIYLAG RGLFFVPDPD
EIMMTDYHSS GTSIDGWGAY RWHNDTVDQL IEQARTTSDE AARKKLYDEV QSIVVEEAPV
AYLNYYVNID VTTSNIKGYR LHPTECSFDL QNVSIS
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