| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1955 |
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| Symbol | |
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| ID | 3625494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 2442881 |
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| End bp | 2446729 |
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| Gene Length | 3849 bp |
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| Protein Length | 1282 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637700837 |
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| Product | hypothetical protein |
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| Protein accession | YP_305473 |
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| Protein GI | 73669458 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAAGTTG AAGAACACAA TGGGCTAATT ATCTTAGTAG TGTCGTCCTT AGTATTTTGT
GCAGCAACCA TACCAGTTCA AGCTGCACAG AGTGATGTTG TAGAATCTCC TACTGCTAAT
TTCTTTGCTT TCTCTACTTC TGGTAACGTA CCATTTGATG CAGCATTTAT GGATACAAGT
AAGGGAAATC CTACTGAATG GTACTGGGAA TTTGGAGATG GGGGTACTTC GACCCAGCGA
GACCCAGATC ATACATATTC AGAGCCAGGA AGCTATACTG TAATACTTAC AGCAAGTAAT
GATGCAGGCA GTGATGTGGC AACAAAAGCT GGTTATATTA TAGTGAAAGG GTCTACAACG
AATACAGAAT CCACAACAGA TACAGAATTC ACAAAGAATA TAGAATCCAC AGAGAATACA
GCACAAGAAC CTGTTGCTAA ATTTTCTGCA ACTCCTAAGT CCGGAAATAC ACCTCTAACA
GTAGAGTTTA CTGACAAAAG CACAGAAACA CCTACTGACT GGTATTGGAC TTTTGGAGAC
GGATATACTT CTACTCAGCA AAATCCAGAG CACACATATT CTGAAGTAGG AAGTTATACA
GTAACACTTA CGGCAACTAA TGATGCTGGT AGTGATAAGA AAACAAAAGC CGGTTACATA
AAAGTAGAGG AGTCTGCAAC AGATACGGAT AAACCCGTTG CTGATTTCTT CGCTTCCGTT
ACTTCTGGTA ATGCACCATT TACTGCAGTA TTTATGGATG GTAGTGTAGG AAACCCTACT
GATTGGTACT GGGACTTTGG AGATGGAGCT ACTTCGAGTC AACGGGATCC AACACATACC
TACTCAGAGC CAGGAAGCTA TACTGTAATA CTTACAGCAA GTAATGATGC AGGCAGTGAT
GTGGCAACAA AAGCTGGTTA TATTATAGTG AAAGGGTCTA CAACGAATAC AGAATCCACA
ACAGATACAG AATTCACAAA GAATATAGAA TCCACAGAGA ATACAGCACA AGAACCTGTT
GCTAAATTTT CTGCAACTCC TAAGTCCGGA AATACACCTC TAACAGTAGA GTTTACTGAC
AAAAGCACAG AAACACCTAC TGACTGGTAT TGGACTTTTG GAGACGGATA TACTTCTACT
CAGCAAAATC CAGAGCACAC ATATTTTGAA GTAGGAAGTT ATACAGTAAC ACTTACGGCA
ACTAATGATG CTGGTAGTGA TAAGAAAACA AAAGCCGGTT ACATAAAAGT AGAGGAGTCT
GCAACAGATA CGGATAAACC CGTTGCTGAT TTCTTCGCTT CCGTTACTTC TGGTAATGCA
CCATTTACTG CAGTATTTAT GGATGGTAGT GTAGGAAACC CTACTGATTG GTACTGGGAC
TTTGGAGATG GAGCTACTTC GAGTCAACGG GATCCAACAC ATACCTACTC AGAACCAGGA
AGCTATACAG TAACACTTAC AGCAAGTAAT GATGCAGGCA GTGATGTGGC AACAAAAGCT
GGTTATATTA TAGTGAAAGG GTCTACAACG AATACAGAAT CCACAACAGA TACAGAATTC
ACAAAGAATA TAGAATCCAC AGAGAATACA GCACAAGAAC CTGTTGCTAA ATTTTCTGCA
ACTCCTAAGT CCGGAAATAC ACCTCTAACA GTAGAGTTTA CTGACAAAAG CACAGAAACA
CCTACTGACT GGTATTGGAC TTTTGGAGAC GGATATACTT CTACTCAGCA AAATCCAGAG
CACACATATT TTGAAGTAGG AAGTTATACA GTAACACTTA CGGCAACTAA TGATGCTGGT
AGTGATAAGA AAACAAAAGC CGGTTACATA AAAGTAGAGG AGTCTGCAAC AGATACGGAT
AAACCCGTTG CTGATTTCTT CGCTTCCGTT ACTTCTGGTA ATGCACCATT TACTGCAGTA
TTTATGGATG GTAGTGTAGG AAACCCTACT GATTGGTACT GGGACTTTGG AGATGGAGCT
ACTTCGAGTC AACGGGATCC AACACATACC TACTCAGAAC CAGGAAGCTA TACAGTAACA
CTTACGGCAA GTAATGATGC AGGCAGTGAC AAGAAAACAA AAACAGACTA TATCACAGTA
ACAGAATCCA CAACGAATAC AGAATCCAAA ACCAATACAG AAATAAGTGC AAGCAAAGTT
GTTTCATTAT ATTATCTTCA ACTTGCTGCA ACTTCCGACC CCGAAAGAAG TCAAGGCGGA
ACAACTCAGG GAGCTGTTGA GTCTGTGAAG ATTGTTGAAG CCGCTTTGGC TGAAGAAGGA
TTGCTTAGTG ATAAGTATGC ATACGACGGA AGCTATGGTA CCGCTACTCT CAAAGCGTAT
AAGACATGGC AGAAGTCTAT TGGTTCTGCG GAGAAGTATT GTGACGGGAT ACCAGGAAAG
AAAGACTTGA CCAAGCTTGG TAACAAGTAT GGATTTACAG TGGATACTTC TACAATTTCA
TACTCTGATA TTTCTGATTC CGAAGCAGAT GCGAACCTTA ATGTCCCTGT TGCTAAGTTT
TCTGGAACTC CTAAATCAGG AAATACACCT CTAACAGTAG AGTTTACTGA CGAAAGCATA
GAAACGCCTA CTGATTGGTA TTGGACTTTT GGAGATGGAT ATACTTCGAC CCAGCAAAAT
CCAGAACACA CATATTCTGA AGCAGGAAGA TATACAGTAA CACTTACGGC AACTAATGAT
GCTGGTAGTG ACAAAGTAAC AAAAACTGGT TGTATAAAGG TAAAGGAACC CACAAAGGAT
ACAGAAATAA GCGCAAGCAC AAGTGTTTCA TTGAGTTATC TTCAAGTAGC AGCTGAATCT
GATCCCGCAA GATCTCAGGG TAAAACTACT CCTGGAGCTA CTGATTCTGT GAAGATTGTT
GAAGCCGCTT TGGTTGAGGA AGGATACCTC GATGATGCCT ATGCATATGA CGGGGCCTAT
GGATCCGCTA CAATCAACGC TTATAAACAA TGGCAGGAGT CTCTTGGTTC CCCAGCAAAA
TATTGTGACG GAATACCAGG AAAGAAAGAC TTGACCAAGC TTGGTAATAA GTATGGATTT
ACAGTGGACA CCTCTACAGT CGCAGACTCT TATCTATTTG ACTCAGAAGA AGATACTACA
AAACTTGATG TTCCTGTTCT TGATGTTCCT GTTGCTGATT TTTCTGCATC TACAACCTAC
GGTGATGCAC CTCTAAAAGT CAGATTTAAT GACGAAAGTA CAGGTTCACC GACTAAATGG
AAGTGGACTT TTGGAGACGG CTCATCTTCA GAAGACACGG ATCCAAGGCA TACTTATTCT
AATCCAGGAA AATATACAGT TACATTAAAG GCAATCAACG AGGCAGGTAG TGATACAGAA
AAGAAATCCG AGTATATAAC AGTAACAGGA TCGACAGCAA GCGCAGCAAA AATTGATACA
TGTGTCTATG TAACTACAAC AATTGGAACA GTCTACAAAA TTACAAAGGC TGGGACAAAC
ACTATACGAC TTACATATTA TGATTCTTCT ACTGCTGAGG ACTATTTGTC TGAAAATAAA
GGGGCAACCG CCGCTGCCAA GGAAATCGTG GATTGTGCTG CGGCTTGGAA CATGAAGCGG
AATAGGGACA TTGAGAGTAT CATAAATCAA ATAAAATCTA CTGTAACTTA TCAGTGTCTG
AGTAGAATGA CTCTGACTCA GCAGTACCCT TCTGATACCA CATCTCTGAG TATAGATATA
CATCTGGATG AGAGTAATTG GAAGTGGCTA TATACGAGTG AAGCGGAGAA TTTAAAGAAA
ATAAAAGATT TTCATGTTCA ACAAATCTTT TCGAATTATG TTCAACCAAT CCTTTCGAAA
TTTGAGTAA
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| Protein sequence | MKVEEHNGLI ILVVSSLVFC AATIPVQAAQ SDVVESPTAN FFAFSTSGNV PFDAAFMDTS
KGNPTEWYWE FGDGGTSTQR DPDHTYSEPG SYTVILTASN DAGSDVATKA GYIIVKGSTT
NTESTTDTEF TKNIESTENT AQEPVAKFSA TPKSGNTPLT VEFTDKSTET PTDWYWTFGD
GYTSTQQNPE HTYSEVGSYT VTLTATNDAG SDKKTKAGYI KVEESATDTD KPVADFFASV
TSGNAPFTAV FMDGSVGNPT DWYWDFGDGA TSSQRDPTHT YSEPGSYTVI LTASNDAGSD
VATKAGYIIV KGSTTNTEST TDTEFTKNIE STENTAQEPV AKFSATPKSG NTPLTVEFTD
KSTETPTDWY WTFGDGYTST QQNPEHTYFE VGSYTVTLTA TNDAGSDKKT KAGYIKVEES
ATDTDKPVAD FFASVTSGNA PFTAVFMDGS VGNPTDWYWD FGDGATSSQR DPTHTYSEPG
SYTVTLTASN DAGSDVATKA GYIIVKGSTT NTESTTDTEF TKNIESTENT AQEPVAKFSA
TPKSGNTPLT VEFTDKSTET PTDWYWTFGD GYTSTQQNPE HTYFEVGSYT VTLTATNDAG
SDKKTKAGYI KVEESATDTD KPVADFFASV TSGNAPFTAV FMDGSVGNPT DWYWDFGDGA
TSSQRDPTHT YSEPGSYTVT LTASNDAGSD KKTKTDYITV TESTTNTESK TNTEISASKV
VSLYYLQLAA TSDPERSQGG TTQGAVESVK IVEAALAEEG LLSDKYAYDG SYGTATLKAY
KTWQKSIGSA EKYCDGIPGK KDLTKLGNKY GFTVDTSTIS YSDISDSEAD ANLNVPVAKF
SGTPKSGNTP LTVEFTDESI ETPTDWYWTF GDGYTSTQQN PEHTYSEAGR YTVTLTATND
AGSDKVTKTG CIKVKEPTKD TEISASTSVS LSYLQVAAES DPARSQGKTT PGATDSVKIV
EAALVEEGYL DDAYAYDGAY GSATINAYKQ WQESLGSPAK YCDGIPGKKD LTKLGNKYGF
TVDTSTVADS YLFDSEEDTT KLDVPVLDVP VADFSASTTY GDAPLKVRFN DESTGSPTKW
KWTFGDGSSS EDTDPRHTYS NPGKYTVTLK AINEAGSDTE KKSEYITVTG STASAAKIDT
CVYVTTTIGT VYKITKAGTN TIRLTYYDSS TAEDYLSENK GATAAAKEIV DCAAAWNMKR
NRDIESIINQ IKSTVTYQCL SRMTLTQQYP SDTTSLSIDI HLDESNWKWL YTSEAENLKK
IKDFHVQQIF SNYVQPILSK FE
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