Gene Mbar_A1939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1939 
Symbol 
ID3626252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2421578 
End bp2422048 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content39% 
IMG OID637700819 
Productpeptidylprolyl isomerase 
Protein accessionYP_305458 
Protein GI73669443 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAATT CTCGTACTGT GAAAAAAGGA GATTATCTTC TTATTGATTA TATTGGAAAA 
TTCGAAGATG GAACGATCTT TGATACTACT TTGAAGGAAA AAGCCCTCAA AGCAGGGATT
TATGACGAAG AAAAAGGTTA CAAGCCTTTT TTTTTCAGAA CGGACGCATT CCAGGTAATT
AAAGGTATCG ACAGGGGAGT GCTTGGAATG AAAGAAGGTG AAGAAAAAAC TTTCATAATT
CCACCTGAAG AAGCCTACGG AAAATATAAG AATTACCTTG TCCAGGAGAT CCCCCTCGAA
AAGCTTGGAC TTAAGAATCC TCCTGAGCCA GAAACAAAGA TCATAACACC CGCTGGGAGT
GAGGTTAAAG TGCTTAACTC CACGGAAACT TCTGCTACCC TGGATTTTAA CCATGAACTT
GCAGGTAAAA CTCTCATCCT TGAAATAAAA CTAGTCTCGA TCATAAACTG A
 
Protein sequence
MENSRTVKKG DYLLIDYIGK FEDGTIFDTT LKEKALKAGI YDEEKGYKPF FFRTDAFQVI 
KGIDRGVLGM KEGEEKTFII PPEEAYGKYK NYLVQEIPLE KLGLKNPPEP ETKIITPAGS
EVKVLNSTET SATLDFNHEL AGKTLILEIK LVSIIN