Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1937 |
Symbol | |
ID | 3626250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 2419849 |
End bp | 2421027 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637700817 |
Product | mannose-1-phosphate guanylyltransferase (GDP) |
Protein accession | YP_305456 |
Protein GI | 73669441 |
COG category | [J] Translation, ribosomal structure and biogenesis [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
TIGRFAM ID | [TIGR01208] glucose-1-phosphate thymidylylransferase, long form |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.235204 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCGT GTATCATGTG CGGAGGGGCA GGGACAAGGC TCAGGCCACT AACTTTCAAG CATCCTAAAC CCAGCATACC GATTCTTAAT AAGCCGTCAG TCCGACATCT GATAGAGCAT CTTTCAAGGG AAGGGTTCAA TGAAATAGTC ATGACCCTAG GGTACATGGG AGAGCGCATA GAAGAGCAGC TCGGAGACGG GCACATGTTT GGAGTACATA TCGACTATGT GTATGAGAAA GAAAAACTCG GAACTGCAGG CGGCGTTAAA AATGCTGAAG AGTACCTGAA AGACGAGCCG TTTATCGTGC TTGGTGGAGA TCATGTACTT AACCTCGACC TGAGGGAGAT GTACCGTTTC CATGAAGCAA ACGATGCTCC GGTAACCATA GGGCTTCTTT CGATTGACGA CCCGAGAGAA TTCGGAATTG CGGACATGGA CATTAACAAC CGGATCCACC GCTTCCTGGA AAAACCGAAA GCAGGCCAGA TATTCAGCAA CCTCGCAAGC ACTGGAATTT ATATTTGCAG CCCTTCTATA TTTGAATGGA TCCCTAAAGG TAAGAAATAC GACTTTGCAA AAGACCTTTT CCCCTTCATG CTTGCAGCCG ACAAAAAAAT CAATGGTGTA CTTGTCCGGG GAAAATGGAC TGACGTAGGA AGTTCGGCCG CCTACAGGCA GGCGCAGCGC TGGATGCTCG ATGCCCTTCC TGGAACAACA ATCGAAGGGA ATTTCACAAC CCGGAACGCA AGAATAAAGG GCCCTCTGTC CATAGGAAAC AATGTATGCA TAGGTTCGAA TTCTTCCCTT GTAGGGCCAA TAGTAATAGG AGAAAACACA ACTATAGGTG ATAATGTCCT TATCGGGCCT TACAGCGTGA TAGGCTCAAA CTGCACTATA GAGAACAATA CAAAGATCCT TTCATCTTAT CTTTTTGATA ATGTGTTTAT AGGAAAGGAC TCCAATCTCT CAGGAGGAGT GGTGTCAGAC GAAACAATTA TAGGAGAACA CTGCTTCCTC GAAAATGGAA CCGTTATCGG ACATAAAGTA CTGATCGGAA GTAACTCAAC AATACATTCC GGAGTTAAGA TCTGGCCCGA GATCGTTATA GATAAGAACT CAAGCATACA GGAAACCGTG ATTAATTCCG GTTATGACGC TGCACATGAA GGTTCGTAA
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Protein sequence | MKACIMCGGA GTRLRPLTFK HPKPSIPILN KPSVRHLIEH LSREGFNEIV MTLGYMGERI EEQLGDGHMF GVHIDYVYEK EKLGTAGGVK NAEEYLKDEP FIVLGGDHVL NLDLREMYRF HEANDAPVTI GLLSIDDPRE FGIADMDINN RIHRFLEKPK AGQIFSNLAS TGIYICSPSI FEWIPKGKKY DFAKDLFPFM LAADKKINGV LVRGKWTDVG SSAAYRQAQR WMLDALPGTT IEGNFTTRNA RIKGPLSIGN NVCIGSNSSL VGPIVIGENT TIGDNVLIGP YSVIGSNCTI ENNTKILSSY LFDNVFIGKD SNLSGGVVSD ETIIGEHCFL ENGTVIGHKV LIGSNSTIHS GVKIWPEIVI DKNSSIQETV INSGYDAAHE GS
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