| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1934 |
|---|
| Symbol | |
|---|
| ID | 3626247 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 2414330 |
|---|
| End bp | 2416213 |
|---|
| Gene Length | 1884 bp |
|---|
| Protein Length | 627 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637700814 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_305453 |
|---|
| Protein GI | 73669438 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02226] N-terminal double-transmembrane domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0768843 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTTTG AAAACCCCCT TGCTCTTATC GCTCTCCTGA GTGTAATCCC GCTTATTATT
ATTTACATGC TACGTCCCAG GCCGAAGGTA TTTGCAATTC CTTCACTCAT GTTTGTCCTT
AAACTTGAGA GGGAAAGAAA ACGGGTTTAT GCCTCACTGA CCAAAATTGT GCAGGACCCG
CTTTTCCTGA TCCAGCTCCT GATGCTTATT CTTCTTTCCA TTGGCGCAGC AGGGTATTAC
TATACTTCAC AGGAACCGCT GAGTGGAGAG CATACAGTGC TAGTCCTTGA TACCTCTGCA
AGTATGCAGG TTGATTCTCG CTTTGCTGAT GCTGTTAAGA TTGCTGATGG TTATGTGAGC
AAGAAAGATA GCATAATCCT GGCTTCGGAT ACGCCTCTTC TTGCTCTTGA TGGAGGCGAC
GCGTCCACTG CAAAGGATAT TTTCAGTAAG GTTCAACCAG GGGCAGGCAC TGCTGACCTG
TCTGCAGCCA TAACTACAGG TATGCGTCTT TTATCAAAGG AAGGAGGGGG AAGAATTATC
GTTATTTCGG ATTTCACGAA TTCGAAAGGA GACGATCCTG TTAGTTCCAA AAACCTGGCT
GAGTCTTACG GGATCTCAGT CAATTTCGTA AAAGTCGGAA AGCCTGCCGA TAATATAGGA
ATCATCAACG GATGGATTGA AGCCGCAGAC GGAAAATACG GCTACACAGG TGTAATTAAA
AACTATAAAG ATCAAGACGA GAAAGTTGAA ATCGAGACCG GAAGTGGGAC TTCAGAAAAC
TCAACGTCGT TTTCCCTTGA CGTCCCGGCA AGAGGTACAA AACAGTTCAC ACTTGAAAAC
CTTGGGCCAG GGATTACAAC AGTTCAGCTT AATGTAAAAG ATAGTTTGTC TGTTGATAAC
AAAGCTTACA TTTCCATTCC AGATACTTCA GAGCAACGTA TACTCTTTGT CACCGACGAT
GGGAAACTGC CTTCGAGAAC TGCACTTTCC TTGCTTCCGA ACAGTAATCT CAGTGTCTTA
AAAGCCGTGC CTTCTTCCAT TGACAATTAC ACGCTTGTAG TGCTTGCGCA GAAAGAAACT
CCAATTGCTA GTGATTCAGT AGAGACAATT GAAAATTATG TAAGAAACGG AGGTAATGCG
GTTTTCATTG CAAGCGGCGC CTTAGCCCCC GAGAAAACCG AGGTTGGCCT GATTAAGATC
TTGCCTGTAA AGCCTACCGG AATTGAGAAT GAAACAAGCG GAAACGATCT TGGAGTTAAG
GAAGTTCAGC AGAGCAGTAT CACAAAGGAC ATTAGAAGCG ATGAGATCTC AGTTCACACA
TACCTTAACG CAACTGAAAG AACCGGTTCG ACAACTCTGG TAGCTCTCGA AAATGGAGTT
CCTATCTTGA GTTACTGGCA GGTAGGTAAA GGGACCGTTT TCTATATGGG ACTGGATGAC
GAACTCGGGG ACAATGCCTG GAACAATTTC CATAACTTGC CTGAGTATCC TGTGTTCTGG
ATAAAACTTG TTGAATGGCT TGGAGGGACA GGTGATATTT CTGAATATAA CCTGAATACA
GGTACTTTGA CGTCTCTTTC GAAGACTGAG GAAATTAAGA CTCCCTCGAA AACTTTCACC
TCAAACCAGC TTCTCTTTGA TGAGGTGGGA ATTTACGAAA TTTCAGGAAA GAAAATTGCA
GTCAACCTTT ATAATGACAA GGAATCAAAC ACAACAGTTG ATGCATCTGA TGTTGTTCAG
CGGGCGGTTG CGGATGATGA GTCCAAACTT GTAAGGGCTG ATACTTATAC AGTCAAAAAT
GACATTACTG ATTACCTGAT AGGAGTTATG TTCCTCCTCA TGCTAGCTGA AATTATGATC
GTGCGCCGGC GGGGTGAACT ATGA
|
|---|
| Protein sequence | MPFENPLALI ALLSVIPLII IYMLRPRPKV FAIPSLMFVL KLERERKRVY ASLTKIVQDP
LFLIQLLMLI LLSIGAAGYY YTSQEPLSGE HTVLVLDTSA SMQVDSRFAD AVKIADGYVS
KKDSIILASD TPLLALDGGD ASTAKDIFSK VQPGAGTADL SAAITTGMRL LSKEGGGRII
VISDFTNSKG DDPVSSKNLA ESYGISVNFV KVGKPADNIG IINGWIEAAD GKYGYTGVIK
NYKDQDEKVE IETGSGTSEN STSFSLDVPA RGTKQFTLEN LGPGITTVQL NVKDSLSVDN
KAYISIPDTS EQRILFVTDD GKLPSRTALS LLPNSNLSVL KAVPSSIDNY TLVVLAQKET
PIASDSVETI ENYVRNGGNA VFIASGALAP EKTEVGLIKI LPVKPTGIEN ETSGNDLGVK
EVQQSSITKD IRSDEISVHT YLNATERTGS TTLVALENGV PILSYWQVGK GTVFYMGLDD
ELGDNAWNNF HNLPEYPVFW IKLVEWLGGT GDISEYNLNT GTLTSLSKTE EIKTPSKTFT
SNQLLFDEVG IYEISGKKIA VNLYNDKESN TTVDASDVVQ RAVADDESKL VRADTYTVKN
DITDYLIGVM FLLMLAEIMI VRRRGEL
|
|---|
| |