| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1920 |
|---|
| Symbol | |
|---|
| ID | 3627199 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 2396481 |
|---|
| End bp | 2397692 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637700801 |
|---|
| Product | glucosaminyltransferase |
|---|
| Protein accession | YP_305440 |
|---|
| Protein GI | 73669425 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.807733 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCCAC TTCTTTTATT CTTCTATATT ATAGGATTCA CCTGCTTTTC TGTAGGTATT
CTGACAATTC CATATTATCC ACTATCTTTA GCTTTCGAAA TGCGCAAAAG CAAACAGAAT
ATATTCAACA GCAAGAATCC CTTTGTCTCT ATAGTGGTAC CAGCCTATAA TGAAGGAAAA
GTGATAGGCC ATTGTATAAA GTCCATTCTA GAATCAAATT ATTCAGAATA TGAGGTTATC
CTAGTAGATG ATGGTTCATC TGATAATACA CTTGAAGAGA TGCAGCATTA TGAAACGAAC
TCTCATGTAA TTGTGGTAAC CAAGAAAAAT GGAGGCAAAG CCTCAGCTCT TAACGTGGGA
CTAAAACTAG CCAAAGGAGA AGTAATATTC TTCGTCGATG CTGACGGCAT CTTTGCTCCT
GATACCATAA GCAAGATGCT CAGTGGTTTT ATCAGCGAAG ATGTAGGTGC AGTATGTGGC
AACGATGCTC CCATTAACCT AGATAAGCTT CAGACACAAC TGGCGAACTT GCTCACTCAC
GTAGGCACAG GCTTTGTGCG TAGAGCGCTG TCTACTATTG ATTGCCTTCC TGTCGTGTCT
GGAAATATAG GCGCCTACCG ATCTAGCACT CTTGAAAAGA CTGGTCCCTT CTTAGAGGGA
TTTATAGGCG AAGATATGGA ATTGACCTGG CGTGTGCACA AGGCAGGTTA CAAAGTAGTG
TTTCAACCTT GGGCCATAGT GTATGCAGAA GCACCCTCAA CTATCACGGG CCTGTGGAAG
CAGCGCGTGC GATGGGCGCG TGGGTTACTT AAGACCGCTT ATATTCACCG AGATATGTTA
TTCAATCCAA AGTATGGCCT TTTTGCCTTT TATTTGCCTA TTAACTTAAC ATCAATGATT
ATCATACCTT TGCTACAGTT GATATCAATC ATACTGTTGC CAATCTTGCT ATTTCGCAAC
ATTAATCCCA TTCCTTTAAG CTGGATAAGC ATCATGGGTT GGCTTGGTAT GTTCTCTTCC
ATTTTTGCAT TATTATTTTC TATTGCCCTT GACCGAGCTT GGCTTGATTT AAAATACTTC
TACGTGATAC CATTATGGGT ACTATATTCC TTTATGATGG ATGTAGTAAT GCTATGGGCG
ATCATCGTTG AGCTGCGTAG AAAGGAGGCA AAATGGAACA AGCTAGATCG GACCGGCATT
GTAAGCCGCT GA
|
|---|
| Protein sequence | MEPLLLFFYI IGFTCFSVGI LTIPYYPLSL AFEMRKSKQN IFNSKNPFVS IVVPAYNEGK
VIGHCIKSIL ESNYSEYEVI LVDDGSSDNT LEEMQHYETN SHVIVVTKKN GGKASALNVG
LKLAKGEVIF FVDADGIFAP DTISKMLSGF ISEDVGAVCG NDAPINLDKL QTQLANLLTH
VGTGFVRRAL STIDCLPVVS GNIGAYRSST LEKTGPFLEG FIGEDMELTW RVHKAGYKVV
FQPWAIVYAE APSTITGLWK QRVRWARGLL KTAYIHRDML FNPKYGLFAF YLPINLTSMI
IIPLLQLISI ILLPILLFRN INPIPLSWIS IMGWLGMFSS IFALLFSIAL DRAWLDLKYF
YVIPLWVLYS FMMDVVMLWA IIVELRRKEA KWNKLDRTGI VSR
|
|---|
| |