Gene Mbar_A1913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1913 
Symbol 
ID3627192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2383909 
End bp2385057 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content44% 
IMG OID637700794 
Productdolichyl-phosphate beta-D-mannosyltransferase 
Protein accessionYP_305433 
Protein GI73669418 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTATA AGCTGGACAT GCCTTCTCTT TCTATCGTAA TGCCTTCTAT GAATGAAGAA 
GAAACCATCC GAATTTGCAT AGAGAAAGCT CAGTCTATAT TCAAAAAATA TGGTATAGAA
GGGGAGATAA TAGTTGCTGA CAACTCGTCA GACAGGACTG CAGAGATCGC AGCGTCAATG
GGTGCAAAGG TAATAGGCCC TATAAAGGGC TATGGAAACG CTTACCTCAA AGGGCTGGCC
GAAGCAAAAG GAGACTATAT TGCTATTGCC GATGCCGATA ATACCTATGA CCTGCTTGAG
CTTGATAAGT TCCTGGACCC TCTTATGGCA GGAGAAGCGG ATTTTATAAT GGGTACCAGG
CTTAAAGGTG ATATCAAAAA AGGAGCTATG CCCTGGCTGC ATCAATATAT AGGCAACCCT
TTCCTGACGG GAATGCTGAA TCTTCTTTTT GGGACGAAAA TTTCGGACGC TCATTGTGGG
ATGCGAGCTT TCACAAAAGA AGCCCTTGAG AAAATGGACC TTAAAACTCA CGGCATGGAA
CTTGCGTCCG AGATGATAAT TGAAGCCGCG AAATGCGGGT TGAGAATAAA AGAAGTCCCC
ATAACCTATT ACTCTCGCCG GGCTCCCTCC AAACTTCGCT CATTTCAAGA TGGCTGGCGG
CATATAAGGT TTATGATGCT ATACCGTCCT TTGCCTTTTC TTTTTCTACC TGGAGCTGTG
GTTTTCGTCC TTGGAGCTCT GATAATCGGT TCTCTTCTTC TTACTGGAGA TATGGCAGAA
AACAGGCTTC ATTCTTTCAT TTTGGGTTGT ATGCTTTTGA TTCTCGGAGG ACAGACGCTA
TCTACCGGTG GTTATTTGAA AACATATGGT CTTATTCGCG GCATGTACCC CAATAATAAG
GGAAACACTG CAAAATGGCT GAATTATCAT TCTCTTGAAA AAGAACTGTT TGCAGGTTCA
ATCATACTTA TCGCAGGCCT CCTGCTCGGG CTAAAAGTAG TATACACTTG GATCAGCTCA
GGATATGGCT CTCTCTCGGA AGTGAAAAGT GCAGTTATTT CAATGGTATT TGCCTTTATC
GGCCTTCAGA TGATTTTCTC GGCAATTGTC CTAAGCGTAA TGCTCCTTGA AGTGGACACT
GACTGGTAA
 
Protein sequence
MLYKLDMPSL SIVMPSMNEE ETIRICIEKA QSIFKKYGIE GEIIVADNSS DRTAEIAASM 
GAKVIGPIKG YGNAYLKGLA EAKGDYIAIA DADNTYDLLE LDKFLDPLMA GEADFIMGTR
LKGDIKKGAM PWLHQYIGNP FLTGMLNLLF GTKISDAHCG MRAFTKEALE KMDLKTHGME
LASEMIIEAA KCGLRIKEVP ITYYSRRAPS KLRSFQDGWR HIRFMMLYRP LPFLFLPGAV
VFVLGALIIG SLLLTGDMAE NRLHSFILGC MLLILGGQTL STGGYLKTYG LIRGMYPNNK
GNTAKWLNYH SLEKELFAGS IILIAGLLLG LKVVYTWISS GYGSLSEVKS AVISMVFAFI
GLQMIFSAIV LSVMLLEVDT DW