| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1907 |
|---|
| Symbol | |
|---|
| ID | 3627186 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 2375392 |
|---|
| End bp | 2376021 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637700788 |
|---|
| Product | GTP-binding protein |
|---|
| Protein accession | YP_305427 |
|---|
| Protein GI | 73669412 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0218] Predicted GTPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.491891 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACCA GTAAGACTGC AGCTGAAAGC GGGGTAAGTT TTGAGATTAT CTTTGTAGGC
CGTTCAAACG TGGGCAAATC CTCGTTACTA AGGGAACTCT TCGGAGCAAA AGTAAGGGTT
GGAAAACGCC CTGGGGTTAC CTTACGCCCT GCGCACGTCC AGGTCTCGGA TCTGCTTATC
ACGGATATGC CTGGCTTCGG CTTCATGAGT GGAGTAAAAG ACCGAAAGCA GGACATAGTA
AAAGACAAAA CCGTGCACTA TATCGAAGAG AATGCCGAAA GGATCAAGCT AGGAGTGCTT
GTAATAGACA GCCCGGCTTT CCCGCAGATA GTAGACCGAT GGGACTCAAA GGACCAGATC
CCGATAGACG TTGAAATGTT CGATTTCCTG AGGGAAGTCG GGATTGATAC CATTATTGCT
GCAAACAAGA TGGATAAGGT AAAAGAAAGC GAGTACGGTT CCCTTCTTGA CGAGATTGCA
ATTCGACTCG GGCTTGAGTC TCCCTGGCAG AACTGGAAGC ATATAATAGC TCCTATCAGC
GCCAAAAAAG GAGACATAAA AGCTTTAAAA GGTCTGCTTC GGGACAGGCT GCACGAAATG
AAGAGGGATG ACCTGTTCAA GTATGTTTGA
|
|---|
| Protein sequence | METSKTAAES GVSFEIIFVG RSNVGKSSLL RELFGAKVRV GKRPGVTLRP AHVQVSDLLI
TDMPGFGFMS GVKDRKQDIV KDKTVHYIEE NAERIKLGVL VIDSPAFPQI VDRWDSKDQI
PIDVEMFDFL REVGIDTIIA ANKMDKVKES EYGSLLDEIA IRLGLESPWQ NWKHIIAPIS
AKKGDIKALK GLLRDRLHEM KRDDLFKYV
|
|---|
| |