Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1889 |
Symbol | |
ID | 3624290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 2355632 |
End bp | 2358496 |
Gene Length | 2865 bp |
Protein Length | 954 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637700770 |
Product | P-type copper-transporting ATPase |
Protein accession | YP_305409 |
Protein GI | 73669394 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase [COG2608] Copper chaperone |
TIGRFAM ID | [TIGR00003] copper ion binding protein [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01511] copper-(or silver)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGTTA CTATAAAAGT TTATGACATG ACCTGTGGTC ACTGCCAAAA AAGAGTGGCA GATGCCATTT CATCTCTTGA GGGGGTAGAA TCCGTTGACG TAAACCTTGA ATCCGAAAGT GCAACGGTTA GCTTTGATTC TGAAAAAGTA AGCCTTGATG ACATAAAGGC AGCTATTCAG AAGGCAGGAT ACCCAACAGA AAGTGAAAAC GAGGTTCAGG AAGAGGCCGG GGCAGAAGTT CCCGAAATAA CAGAGGCCGA AGGGGAGACT TCAAAAACTG CGGAGCCAAC TTTAAAGGAA CCAAAGGAAC CTGAAGAAGC TCCTAAAACC TGTCCCCTGA CTGAAACTTG CGCACTGCCT GAAGAGGAAC CTCAAACCTT AGGCCTGAAA ACCGGTCGAA AAGAAATAAC GCTTGGAGTG TCCGGTATGA CCTGTTCGGC CTGCGCCTCA AATATTGAGA GAGTACTGAA GAAAAAAGCA GGCGTGGACT CAGCAGTTGT CAACCTTGAA CTTGGAAGGG CAAATGTTAG TTTTGATCCC TCACTTATCT CTCCGAAAGA AATAGGGGAA ACCATCGAGT CTATCGGATA TAAGGTAGAA AAAGATTCCG TAACTCTGAG TCTTGAAGGT ATGAGCTGTG CCTCTTGTGC TGCAAATATC GAGAAAGTCC TTAACAGGAC TGAAGGCGTG ATTTCAGCGT CTGTAAATTT CCCGCTTGAA AAGGCAGTTG TAGAGTTTGA CTCCTCCCGC GTCTCTGTCA GAGAAATAAT TGCTGCAGTT CAGGGAATTG GCTATGGAGC ATTTGTTAAA ACCGAAGCTG TTGAGTATGA AGACAGAGAG CAGATGTCCA GAGACGCTGA AATCAGGAGG CAGAGAAATA ACCTGATAAT TGCTCTTGTT CTGGGAATTC CAATAGGGCT GGGAAACATG AGTATGATGT TTCCTTTCCT GTCTTTTGTA CCTGATTTCC TTTCCAATCA TATCGTCCTT TTTATACTAT CTACTCTTGT CCTCCTTTTC CCTGGCAGAC AATTTTTTGT AGGGACTATT AGGGGGTTCA AATATGGCGT AACTGACATG AACCTGCTGA TCGCAGCAGG GACAGGATCA GCCTATCTTA TCAGTGTAGC AGCCACATTT CTTGATCTTG GCCCTGGGTA TAATAGTCTG TATTATGACA CCGTAGCTTT CCTGATCATC TTCATTGTCC TTGGCAGGTA TCTCGAGGCA AGGGCAAGGG GTCAAACCTC TGAAGCAATT AGAAAACTGA TGGGCCTCAG GGCAAAAACT TCCAGAATCC TTGTAAATGG CATTGAAAAA GAGATTCCTG TCGAAGAAGT AGCAGTTGGC GACATTGTTG TTGTAAGGCC TGGAGAAAAA ATTCCTGTTG ATGGAATTAT AGTTGAGGGA GGCTCTGCAG TAGATGAGTC CATGCTCACT GGAGAAAGCA TTCCTGTAGA AAAATTTCCG GGTGATACCG TTATAGGAGC TACTCTTAAC AAGACAGGAT CTTTTAATTT TCGAGCTACA AAAGTCGGGG CTGATACTGC CCTTGCTCAG ATAATCAGGC TTGTTGAGAC TGCGCAGACT ACAAAAGCTC CCATTCAGAG AGTTGCAGAT GTTGTTGCCG GAAACTTCAT AGTAACCGTA CATATTATTG CGCTTCTGGC ATTTTTCTTC TGGTTCTTCA TAGGTTACTG GCGCTATGGA GTCGGGGAAT CCGTAACTCT AGGTGGAATC AGCCCATTCC TGTTTTCCTT GCTTATAGCC ATTACTGTGC TTGTAATCTC GTGCCCATGT GCAGTCGGGC TTGCAACTCC TGCCGCTATT ATGGTCGGTA CCGGTCGAGG TGCGGAAAAC GGGGTCCTTA TAAAAGGTGG GGAAGCTCTT GAAAGAGCGC ATAAACTTGA TACTATCGTT TTTGACAAAA CAGGCACGCT TACGGCAGGT ACTCCGAAGC TGACAGATTT AGTTGCCGTT TCCGGTCACG AGGAAAAAGA CGTACTTTTT ATTGCAGCAA CGGCTGAGAG AGGCTCCGAG CATCCCCTTG GGGAAGCTAT TGTAAACGGG GCCGAAGAAC AGGGGATCAG GCCAGGAAAA GCAGAAAATT TCCATTCGAT TCCCGGAAAA GGAGTAGAAG CCTATTTTGA AGAAAAAAGA ATTTTGCTTG GCACGCGCAA ACTTATGGAA GAAGAAGGAT TTTCCTTTAA AGAATTAGAA GCTGAAATGC GAGCTTTTGA AGAGAGCGGA AAAACTGCAA TGCTCGTAGC TTTCGGGGAA GAAATTATTG GTCTTGTTGC AGTTGCTGAT ATCCTGAAGG AAAACTCCAT AGAAGCTATT GAAACTCTTA ACAAAATGGA TCTAGAAGTA GTTATGATCA CAGGTGATAA TGCCGTTACA GCTAATGCAA TAGCAAAAGA GGTAGGTATT CCAAGAGTGC TGGCCGAGGT GCTTCCTGAA GACAAAGCAA GTGAAATTAA GAAGCTTCAG GAAGAGGGCA AGCTTGTCGG AATGGTGGGT GACGGCATTA ATGATGCCCC TGCGTTAATT CAGTCCGATG TCGGAATTGC AATGGGAGCA GGTACAGATG TAGCAATGGA ATCCGCAAAA ATTGTGCTTA TCAAAAATGA CCCAAGAGAT GTGGTCTCAG CCATTAAGCT GAGCCGGCTT ACCATAAACA AAATTAAACA GAACCTGCTA TGGGCTTTTG GATATAATAC GATAGGAATT CCAATTGCAG CCGGAATTCT TTATCCCTTT ATTCACAGGG TCCTGATTAC ACCTGAATTT GCTGCCGCTT TCATGGCTCT AAGTTCGGTC TCAGTGACTA CCAATTCCCT GTTAATGAAA AGAAGTAAGC TTTAA
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Protein sequence | MEVTIKVYDM TCGHCQKRVA DAISSLEGVE SVDVNLESES ATVSFDSEKV SLDDIKAAIQ KAGYPTESEN EVQEEAGAEV PEITEAEGET SKTAEPTLKE PKEPEEAPKT CPLTETCALP EEEPQTLGLK TGRKEITLGV SGMTCSACAS NIERVLKKKA GVDSAVVNLE LGRANVSFDP SLISPKEIGE TIESIGYKVE KDSVTLSLEG MSCASCAANI EKVLNRTEGV ISASVNFPLE KAVVEFDSSR VSVREIIAAV QGIGYGAFVK TEAVEYEDRE QMSRDAEIRR QRNNLIIALV LGIPIGLGNM SMMFPFLSFV PDFLSNHIVL FILSTLVLLF PGRQFFVGTI RGFKYGVTDM NLLIAAGTGS AYLISVAATF LDLGPGYNSL YYDTVAFLII FIVLGRYLEA RARGQTSEAI RKLMGLRAKT SRILVNGIEK EIPVEEVAVG DIVVVRPGEK IPVDGIIVEG GSAVDESMLT GESIPVEKFP GDTVIGATLN KTGSFNFRAT KVGADTALAQ IIRLVETAQT TKAPIQRVAD VVAGNFIVTV HIIALLAFFF WFFIGYWRYG VGESVTLGGI SPFLFSLLIA ITVLVISCPC AVGLATPAAI MVGTGRGAEN GVLIKGGEAL ERAHKLDTIV FDKTGTLTAG TPKLTDLVAV SGHEEKDVLF IAATAERGSE HPLGEAIVNG AEEQGIRPGK AENFHSIPGK GVEAYFEEKR ILLGTRKLME EEGFSFKELE AEMRAFEESG KTAMLVAFGE EIIGLVAVAD ILKENSIEAI ETLNKMDLEV VMITGDNAVT ANAIAKEVGI PRVLAEVLPE DKASEIKKLQ EEGKLVGMVG DGINDAPALI QSDVGIAMGA GTDVAMESAK IVLIKNDPRD VVSAIKLSRL TINKIKQNLL WAFGYNTIGI PIAAGILYPF IHRVLITPEF AAAFMALSSV SVTTNSLLMK RSKL
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