Gene Mbar_A1886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1886 
Symbol 
ID3624287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2353073 
End bp2353717 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content37% 
IMG OID637700767 
ProductFMN-binding protein 
Protein accessionYP_305406 
Protein GI73669391 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.340076 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.59613 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATATTAG AAAATTTCAA AAGAGAGTCA ATAGTACCCT TGCCAGTGGC ATTCATATCA 
ACAATCAGTG AAAATGGAAT TAGAAATATA GCTCCATATT CTTGTTTTAT GCCTGTTTTA
CGTCCATTTG ATTTGGTTTG TGTAGCTTCA GCAAAAAGGA GAGATACATT AGATAATTTA
AAAAGCACAG GGGAATTCGT TATTAACATG CCTGTTACTG ATATGGCAGA TAAAGTGATA
CCAACGGCTT CACACGTCCC TCCCGACGTT GACGAATTCG AATTAGCTGG TCTAAAGGAG
AAACCTTCAA AAAAGATCAA GGCTCCAGGA ATTGAAGGAT GCTACGCATG GATGGAATGT
AAACTGGATC ACATAATTGA TGAAGTATAC AATGGCTTTC CTTACGCATT GATTCTTGGT
AAAGTAGTGT ATCTTGAGAT AGAAGATAGC GTCTACAACA AAGAAAGTGG TTCCTGGGAC
TTAGAAAAAG CTAAACCATT AATGATGACA GGGTCAGACG ATGGTATGCA TTTCTGTACT
GTCAACGATA TTGGTAAATT TGAGCCTTAT GGAGCTATGT TCAAGAACGG TAAAGATCCT
CTAGAAAGGA TATATAAAAA AGAGGAGGGT CAAGAATGCA AGTAA
 
Protein sequence
MILENFKRES IVPLPVAFIS TISENGIRNI APYSCFMPVL RPFDLVCVAS AKRRDTLDNL 
KSTGEFVINM PVTDMADKVI PTASHVPPDV DEFELAGLKE KPSKKIKAPG IEGCYAWMEC
KLDHIIDEVY NGFPYALILG KVVYLEIEDS VYNKESGSWD LEKAKPLMMT GSDDGMHFCT
VNDIGKFEPY GAMFKNGKDP LERIYKKEEG QECK