Gene Mbar_A1880 details

Gene Information

• Locus tag: Mbar_A1880
• ID: 3624582
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanosarcina barkeri str. Fusaro
• Kingdom: Archaea
• Replicon accession: NC_007355
• Strand: +
• Start bp: 2349279
• End bp: 2350019
• Gene Length: 741 bp
• Protein Length: 246 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637700761
• Product: hypothetical protein
• Protein accession: YP_305400
• Protein GI: 73669385

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.0319667
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 20
• Fosmid unclonability p-value: 0.844797
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCAGACA GCAAAAATAT CATAATTGGT CTATTAGTAC TGGCAGTAAT AGTACTTCTT 
GTTTTTTTGG CTTTCAGGCC AATGACATAC AATTCAACCT ATAGCCAGGG AGATTATCAA 
CCAGGGCAGA TGGGGCCAGG GATGATGAAC AATCCAGGCT ATAATTATAG CTATGGACCG 
GGAATGATGA ATAATAATTC AGGCCATAAA TATGGCTATG GACCGGGAAT GATGGGCAAT 
ATGATGGCAA TATATTATCC TGAGTCAAAA CCTGTAACCC AGGATGAGGC TTTGAAAAGT 
CTGGAGAACT TCGCCAGCCA GTATGGCTCG AATATTCAGG TCGAGGACTT CATGATATTT 
AGTGGCAATT ATTATGCTGT TTTAAAGGAC ACAAACAGTA GTCAGGATAT AGCTGAAGTG 
CTGGTGGATC GCTATTCAGG GTTAGCCTAT TCTGAACCAG GACCGAACAT GATGTGGAAC 
ACACGCTTTG GAGCTGGCAG AACAACGACC GGAGGGCCTG AGTATGATAT AAATGAGGCT 
AAAAAGCTGG CAGGAGATTT CTTAACAGGC TACCTACCGG GAGCGCAGGT CCTTGGATCT 
AATGAAATGC CCGGTTATTA CACTTTTGAT TTTGGAAGAC AAGATATTGA AGGGATGTTG 
AGCGTAAATG CCTACAGTGG TCAGATCTGG GTGCATACCT GGCACGGGCC TTACCTAGGC 
GAGACAAACA TAACAGGCTA A 

 

Protein sequence

MADSKNIIIG LLVLAVIVLL VFLAFRPMTY NSTYSQGDYQ PGQMGPGMMN NPGYNYSYGP 
GMMNNNSGHK YGYGPGMMGN MMAIYYPESK PVTQDEALKS LENFASQYGS NIQVEDFMIF 
SGNYYAVLKD TNSSQDIAEV LVDRYSGLAY SEPGPNMMWN TRFGAGRTTT GGPEYDINEA 
KKLAGDFLTG YLPGAQVLGS NEMPGYYTFD FGRQDIEGML SVNAYSGQIW VHTWHGPYLG 
ETNITG