Gene Mbar_A1869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1869 
Symbol 
ID3624571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2336509 
End bp2337714 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content44% 
IMG OID637700750 
Productiron(III) dicitrate-binding protein 
Protein accessionYP_305389 
Protein GI73669374 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.444655 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.203849 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATTA ATCATAATAA TAAATTATAT AAAATTATTT TAATAGGATT GCTCGTTGCT 
GCCCTTGTAG TGACTTCAGG GTGCACGGAC AAATCCACAT CTGGTGATAA TGGATCATCT
CCATCAGAAG CTTCAGGAGT TTCAGGTGCC GATAAGGCAG CAGAATCTGG AGAGTCTACA
ATCACGGACG GGTTTGGCAG GGAAGTTACC ATACCTGAAA ATGTGGAAAG GGTTGTTTGC
TCAGGAGCCG GATGCCTGCG TTATCTTGTA TACCTGCAGG CTCAGGACGA CGTAGTAGGG
GTTGATAGCT TAGAGAAAGA GGAAAGCGCG TTTGAAGGTC GTCCCTATGC TCTTGCAAAC
CCTCAGCTTA AAGACTATCC CTTGATTGGG GAATTCAGAG GCAACGATGA TCCTGAAAAG
ATAATTTCCA TCAGTCCCCA GGTCATCCTG AAAACCGGCA CAAGTGGCCA GTCGGCAGTA
ACCAATGGTG CTGATGCCGA TACGCTTCAG AACAAAACTG GCATTCCTGT TGTCATGTTC
CCTTACGGCT CTTTAAAGAA CGAAGAGCAG GAAGCTGAAA TATACAGTTC ACTCCGGATA
ATGGGTCAGG TAGTAGACAA ACAGGAAAGA GCAGAGGAAG TAATCAATTA TATCAATGCT
ACAATGCAAG ACCTGGAAAA CAGGACTGCC GACATTCCGG AATCCGAAAG AAAAACTGCC
TATATTGGTG GTGTGAGCAT GGCTGGAGCT CATGGAATAA TCTCAACGGA ACCTGCTTAT
CCACCATTCC TCTGGGTGAA TGCAAAGAAT GTTGCAGCCG GAATGGGTGC AGATCATGCG
GATATTGCTA AAGAAGCACT TGTAGACTGG GACCCAGAGT ACATATTTAT TGATATCGGC
ACTCTCCAGG TTGGTAACGA AGGAGCAATT GGAGAGCTTA AGAAGGATAC ATCTCTCTCA
GGGCTCTCAG CTGTAAAGAA TAAAAAGGTC TATGGAGTGA TTCCATACAA CTACTACAGC
ACCAACTATG AGTCTGTGCT TGCAAATGCT TATTTTGTGG GAAAAGTGCT TTATCCGGAC
AGGTTTGAAG ATATAGATCC GGAAGCAAAA GCCGACGAAA TTTATACATT CTTCGTTGGC
AAACCCGTGT TCTCTGAAAT TAATGAACAG TACGACAACC TTGGGTTCAA ATCGATTCCA
CTGTAA
 
Protein sequence
MKINHNNKLY KIILIGLLVA ALVVTSGCTD KSTSGDNGSS PSEASGVSGA DKAAESGEST 
ITDGFGREVT IPENVERVVC SGAGCLRYLV YLQAQDDVVG VDSLEKEESA FEGRPYALAN
PQLKDYPLIG EFRGNDDPEK IISISPQVIL KTGTSGQSAV TNGADADTLQ NKTGIPVVMF
PYGSLKNEEQ EAEIYSSLRI MGQVVDKQER AEEVINYINA TMQDLENRTA DIPESERKTA
YIGGVSMAGA HGIISTEPAY PPFLWVNAKN VAAGMGADHA DIAKEALVDW DPEYIFIDIG
TLQVGNEGAI GELKKDTSLS GLSAVKNKKV YGVIPYNYYS TNYESVLANA YFVGKVLYPD
RFEDIDPEAK ADEIYTFFVG KPVFSEINEQ YDNLGFKSIP L