Gene Mbar_A1864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1864 
Symbol 
ID3624566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2328604 
End bp2330574 
Gene Length1971 bp 
Protein Length656 aa 
Translation table11 
GC content40% 
IMG OID637700745 
Producthypothetical protein 
Protein accessionYP_305384 
Protein GI73669369 
COG category[R] General function prediction only 
COG ID[COG5271] AAA ATPase containing von Willebrand factor type A (vWA) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.935351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.282908 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCG GTTTTTGTAA TTCACTATTT TATATATTAT TGATAATGCT AACAATCCTT 
GGAATGGCTC CCGGAATGGT ACATGCTCTA GGAGACAACG AAAGCTCAGT CTCAGATAGT
GGAAGCTCAG ATACAGGAGA TTCAGTCTCA GACAGCGGAA GTTCAGATAC AGGAGATTCA
GTCTCAGACA GTGGAAGTTC AGATACAGGA GATTCAGTCT CAGACAGCGG AAGTTCAGAT
ACAGGAGATT CAGTCTCAGA CAGCGGAAGT TCAGATACAG GAGATTCAGA CACGGACAAA
GTGGATTCTG GCTCAAGTGA TGGAAGTTCC GATTCTGGCT CGAGTGATAG TAGTTCAGAC
TCAGACTTAA GTGATGGAAA TTCCGATTCT GACTCAAGTG ATAGTAGTTC AGACTCAGAC
TTAAGTGATG GAAGTTCAGA TTCTGGCTCA AGTGATAGTA GTTCAGATTC AGGGTTAGAT
GATGGAAATT CAAACAATAG CCCAGATGAT GGTAATTCAG ATTCAGGGTT AGATGATGGA
AATTCAAACA ATAGCCCAGA TGATGGTAAT TCAGACTCAG GGTTAGATGA TGGAAATTCA
AACAATAGCC CAGATGATGG CAATTCAGAC TCAGACTTAA GTGATGGAAG TTCAGATTCT
GGCTCGAATG ATAGTAACTC AGATTCAGGG TTAGACGATG GAAATTCAGA CACTAGCCCA
GATGATGGTA ATTCAGATTC AGGCCCAAAT AATGGGAGTT CAGATTCAGA CTCAAATGAT
AAAAATTCCG ATTCTGGCTC GAATGATAGT AATTCAGATT CCAGCTTAGA CAATGGAAAT
TCAAGCACTA GTCCTGATGC CGGTAATTCT GATTCCGGCT TAGACGATGG AAATTCGGGC
ACTAGCTCGG ATGATAAAAA TTCAACTTCC GATTCAGATA ACGTAGATTC TAGCAAAGGA
GATTCAGACT CAGGTAGCGG TGACTCAGAT ACCAAAAATT CAGATACTGG AAATTCAGAC
ACAAATCAGG ATACTGGAAA TTCAGAAACC CAAAATTCAG ATACCGTAAG TTCAGATAAT
GGAAATTCTG ATACCCAAAA TTCGGATAAC ACAAGTTCAG ATAGTGGGGA TTCTGATACC
CAAAATTCGG ATAACACAAG TTCAGATAAC GGGAGTTCAG ATACTGGAAA TGAGGATTCA
GGTTCTAGTG GTTCAGGTTC TAGTGGTTCA GGTTCTAGTG GTTCAGGTTC TAGTGGTTCA
GGTTCTGGTG GTTCGGGTAT GAATCTTGTT TCCAGCGAGC CAGCAACCAA TATTGCTGCT
CAGGAACTTT CTATCATGAG TATCGTGAGT GGCTATCCTG TCCAGTTCGA TTTTACAAAA
AATGCCACGT GCATTGTAAA TATTGAATTT GATCCTAAGA AAACATTCAG AAAAACAACA
ACAGTTGTAG AAGAACTTAA AAACAGATCC ACCCTTGTCC AGACCTCTCC TGAAGGCACA
GTATATAAAT ATGTGAATAT CTGGGTAGGA GATCGTGGAG CAGGGCTTCC GACTTCCATT
AATAGTGGGT TTGTAGAGTT TAAGGTTGAG AAGGCATGGA TCAAAGATAA TAATATTAGT
GAGACTCAGG TAGTCCTTCA AAGATATGAT AGTAACTGGC AGCCACTTTA CACGGAAAAA
GTTGGAGAAG ATGATAATTA TATTTACTTT AAATCGGAAA CTCCTGGCTA TTCCTTCTTT
GCAATAACGG AATATACCGG GCAAAATCTA ATGAATATCA ATGGGGCTGA AAAAATACAG
GAAACCCTGA GAAATCTGGG AAACGAAGGA AAAGCAGCTC TTTACGGAAA TGCAGGAAAT
AATAGCAGTA GGATAAAGAA TCCAATGGGA ACAGCAAGGA TACTTATGGC AATTTCCTTA
CCGCTTTTCA TGCTTCTTGT TGGATATGGC ATATTTAAGA AAAAGATATG A
 
Protein sequence
MKAGFCNSLF YILLIMLTIL GMAPGMVHAL GDNESSVSDS GSSDTGDSVS DSGSSDTGDS 
VSDSGSSDTG DSVSDSGSSD TGDSVSDSGS SDTGDSDTDK VDSGSSDGSS DSGSSDSSSD
SDLSDGNSDS DSSDSSSDSD LSDGSSDSGS SDSSSDSGLD DGNSNNSPDD GNSDSGLDDG
NSNNSPDDGN SDSGLDDGNS NNSPDDGNSD SDLSDGSSDS GSNDSNSDSG LDDGNSDTSP
DDGNSDSGPN NGSSDSDSND KNSDSGSNDS NSDSSLDNGN SSTSPDAGNS DSGLDDGNSG
TSSDDKNSTS DSDNVDSSKG DSDSGSGDSD TKNSDTGNSD TNQDTGNSET QNSDTVSSDN
GNSDTQNSDN TSSDSGDSDT QNSDNTSSDN GSSDTGNEDS GSSGSGSSGS GSSGSGSSGS
GSGGSGMNLV SSEPATNIAA QELSIMSIVS GYPVQFDFTK NATCIVNIEF DPKKTFRKTT
TVVEELKNRS TLVQTSPEGT VYKYVNIWVG DRGAGLPTSI NSGFVEFKVE KAWIKDNNIS
ETQVVLQRYD SNWQPLYTEK VGEDDNYIYF KSETPGYSFF AITEYTGQNL MNINGAEKIQ
ETLRNLGNEG KAALYGNAGN NSSRIKNPMG TARILMAISL PLFMLLVGYG IFKKKI