Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1864 |
Symbol | |
ID | 3624566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 2328604 |
End bp | 2330574 |
Gene Length | 1971 bp |
Protein Length | 656 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637700745 |
Product | hypothetical protein |
Protein accession | YP_305384 |
Protein GI | 73669369 |
COG category | [R] General function prediction only |
COG ID | [COG5271] AAA ATPase containing von Willebrand factor type A (vWA) domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.935351 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.282908 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCCG GTTTTTGTAA TTCACTATTT TATATATTAT TGATAATGCT AACAATCCTT GGAATGGCTC CCGGAATGGT ACATGCTCTA GGAGACAACG AAAGCTCAGT CTCAGATAGT GGAAGCTCAG ATACAGGAGA TTCAGTCTCA GACAGCGGAA GTTCAGATAC AGGAGATTCA GTCTCAGACA GTGGAAGTTC AGATACAGGA GATTCAGTCT CAGACAGCGG AAGTTCAGAT ACAGGAGATT CAGTCTCAGA CAGCGGAAGT TCAGATACAG GAGATTCAGA CACGGACAAA GTGGATTCTG GCTCAAGTGA TGGAAGTTCC GATTCTGGCT CGAGTGATAG TAGTTCAGAC TCAGACTTAA GTGATGGAAA TTCCGATTCT GACTCAAGTG ATAGTAGTTC AGACTCAGAC TTAAGTGATG GAAGTTCAGA TTCTGGCTCA AGTGATAGTA GTTCAGATTC AGGGTTAGAT GATGGAAATT CAAACAATAG CCCAGATGAT GGTAATTCAG ATTCAGGGTT AGATGATGGA AATTCAAACA ATAGCCCAGA TGATGGTAAT TCAGACTCAG GGTTAGATGA TGGAAATTCA AACAATAGCC CAGATGATGG CAATTCAGAC TCAGACTTAA GTGATGGAAG TTCAGATTCT GGCTCGAATG ATAGTAACTC AGATTCAGGG TTAGACGATG GAAATTCAGA CACTAGCCCA GATGATGGTA ATTCAGATTC AGGCCCAAAT AATGGGAGTT CAGATTCAGA CTCAAATGAT AAAAATTCCG ATTCTGGCTC GAATGATAGT AATTCAGATT CCAGCTTAGA CAATGGAAAT TCAAGCACTA GTCCTGATGC CGGTAATTCT GATTCCGGCT TAGACGATGG AAATTCGGGC ACTAGCTCGG ATGATAAAAA TTCAACTTCC GATTCAGATA ACGTAGATTC TAGCAAAGGA GATTCAGACT CAGGTAGCGG TGACTCAGAT ACCAAAAATT CAGATACTGG AAATTCAGAC ACAAATCAGG ATACTGGAAA TTCAGAAACC CAAAATTCAG ATACCGTAAG TTCAGATAAT GGAAATTCTG ATACCCAAAA TTCGGATAAC ACAAGTTCAG ATAGTGGGGA TTCTGATACC CAAAATTCGG ATAACACAAG TTCAGATAAC GGGAGTTCAG ATACTGGAAA TGAGGATTCA GGTTCTAGTG GTTCAGGTTC TAGTGGTTCA GGTTCTAGTG GTTCAGGTTC TAGTGGTTCA GGTTCTGGTG GTTCGGGTAT GAATCTTGTT TCCAGCGAGC CAGCAACCAA TATTGCTGCT CAGGAACTTT CTATCATGAG TATCGTGAGT GGCTATCCTG TCCAGTTCGA TTTTACAAAA AATGCCACGT GCATTGTAAA TATTGAATTT GATCCTAAGA AAACATTCAG AAAAACAACA ACAGTTGTAG AAGAACTTAA AAACAGATCC ACCCTTGTCC AGACCTCTCC TGAAGGCACA GTATATAAAT ATGTGAATAT CTGGGTAGGA GATCGTGGAG CAGGGCTTCC GACTTCCATT AATAGTGGGT TTGTAGAGTT TAAGGTTGAG AAGGCATGGA TCAAAGATAA TAATATTAGT GAGACTCAGG TAGTCCTTCA AAGATATGAT AGTAACTGGC AGCCACTTTA CACGGAAAAA GTTGGAGAAG ATGATAATTA TATTTACTTT AAATCGGAAA CTCCTGGCTA TTCCTTCTTT GCAATAACGG AATATACCGG GCAAAATCTA ATGAATATCA ATGGGGCTGA AAAAATACAG GAAACCCTGA GAAATCTGGG AAACGAAGGA AAAGCAGCTC TTTACGGAAA TGCAGGAAAT AATAGCAGTA GGATAAAGAA TCCAATGGGA ACAGCAAGGA TACTTATGGC AATTTCCTTA CCGCTTTTCA TGCTTCTTGT TGGATATGGC ATATTTAAGA AAAAGATATG A
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Protein sequence | MKAGFCNSLF YILLIMLTIL GMAPGMVHAL GDNESSVSDS GSSDTGDSVS DSGSSDTGDS VSDSGSSDTG DSVSDSGSSD TGDSVSDSGS SDTGDSDTDK VDSGSSDGSS DSGSSDSSSD SDLSDGNSDS DSSDSSSDSD LSDGSSDSGS SDSSSDSGLD DGNSNNSPDD GNSDSGLDDG NSNNSPDDGN SDSGLDDGNS NNSPDDGNSD SDLSDGSSDS GSNDSNSDSG LDDGNSDTSP DDGNSDSGPN NGSSDSDSND KNSDSGSNDS NSDSSLDNGN SSTSPDAGNS DSGLDDGNSG TSSDDKNSTS DSDNVDSSKG DSDSGSGDSD TKNSDTGNSD TNQDTGNSET QNSDTVSSDN GNSDTQNSDN TSSDSGDSDT QNSDNTSSDN GSSDTGNEDS GSSGSGSSGS GSSGSGSSGS GSGGSGMNLV SSEPATNIAA QELSIMSIVS GYPVQFDFTK NATCIVNIEF DPKKTFRKTT TVVEELKNRS TLVQTSPEGT VYKYVNIWVG DRGAGLPTSI NSGFVEFKVE KAWIKDNNIS ETQVVLQRYD SNWQPLYTEK VGEDDNYIYF KSETPGYSFF AITEYTGQNL MNINGAEKIQ ETLRNLGNEG KAALYGNAGN NSSRIKNPMG TARILMAISL PLFMLLVGYG IFKKKI
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