| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1858 |
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| Symbol | |
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| ID | 3625374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 2321619 |
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| End bp | 2322413 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637700739 |
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| Product | putative ABC transport system permease protein |
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| Protein accession | YP_305378 |
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| Protein GI | 73669363 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0390] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | [TIGR00245] conserved hypothetical protein TIGR00245 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0986378 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.82732 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATTT ATGACATTAG CTATACCTCG TTAATTTTCT GTTTTTTCTT ACTTGCAATT
CCTATTTTCA TAAGCTGGAA AATTCGGCTT GAACTCGAAA AAAGTACTCT GGAAGCTGTC
TTCAGGATGT CAATCCAGCT ATTTTTAGCA GGCATTTTTC TGAACTTTAT TTTTAATCTG
AATAACGGAC TTTTAAATCT GGCCTGGGTA GGAATAATGA TCTTCTTTGC GTCCTATACG
GCAATAAAAA GTGTGGATCT TAATGTAAAA AAACTCTTTG TGCCCATCAT TTTAGCCATT
GCCTTTTCAA GCCTGGCAGT TCTATTATAT TTCAATAAAT TCGTTATTAA TCTGGAAAAT
CTCCTTGACG CACGTTATCT GATCCCTATA GCAGGCATGT TTCTTGGAAA TTCTCTTCGA
GGAAATGTGG TAGGGATAGG TGACTTTTAT AGCGATATCA AGCGAAACGA GAACCGCTAT
CTTTACAGCT TATCTCTTGG TGCAGGCATG TATGAGGCTG TTCTACCATA CCTGCGAAAA
AGTTTAAGGG CTGCAGTAAA ACCCACTTTA GCAAATATCG CATCCGTGGG GATCGTCACT
TTGCCAGGAA TGATGACAGG ACAGATCCTT GGGGGAGCAA GTCCTCTAGT TGCCATTAAG
TATCAGATTA CCATCATGAT AGCACAATAT GTTTCAACCC TGCTTGGAAC AACTCTTAGC
ATTCTCACAA GCTTCAGGAC AGCTTTTGAT GAATATGGAC TTGTAAATAA GAAGTTATAC
GAGAAAAATC TCTGA
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| Protein sequence | MPIYDISYTS LIFCFFLLAI PIFISWKIRL ELEKSTLEAV FRMSIQLFLA GIFLNFIFNL
NNGLLNLAWV GIMIFFASYT AIKSVDLNVK KLFVPIILAI AFSSLAVLLY FNKFVINLEN
LLDARYLIPI AGMFLGNSLR GNVVGIGDFY SDIKRNENRY LYSLSLGAGM YEAVLPYLRK
SLRAAVKPTL ANIASVGIVT LPGMMTGQIL GGASPLVAIK YQITIMIAQY VSTLLGTTLS
ILTSFRTAFD EYGLVNKKLY EKNL
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