| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1854 |
|---|
| Symbol | |
|---|
| ID | 3625370 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 2317644 |
|---|
| End bp | 2318171 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637700736 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_305375 |
|---|
| Protein GI | 73669360 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0466742 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAATGA ACTTTAAAGG CAAAAGCCCG AAGATATCGG AAACGGCTTT TATTGCAGAT
TCTGCAGATG TTATAGGGGA TATTGAAATA TGGGATTTTT CAAGTGTGTG GTTTAATGCC
GTGCTTCGCG GAGACAGGAA TAAAATAAAA ATCGGAAGCC GAACAAGTAT CCAGGATAAT
GTGGTAATTC ATGCTGATCC TGAGAATGGA GTTCAGATAG GGAATGATGT AACTGTAGGA
CACGGAGCTG TGCTTCACGG ATGTAGAATC GAAAACAATG TACTTATAGG AATGAACTCT
ACAGTATTGA ACGGGGCTGA GATAGGAAAA AATTCTATTG TGGGTGCAAA TGCGCTGATT
TCTGAAGGGA AGAAATTTCC AGAGAACAGT TTGATAATTG GAGTTCCGGG GAAGGTAAAA
AGGGAAATTA AGAAATTCGA GATTGAAGCT ATAGCAGAAA ACGCTGCAGA ATATGTGGAG
TTTGTCAAAG AGTACAGGGA AGAAGTAAAA AAGATACAAA AGAAGTAA
|
|---|
| Protein sequence | MIMNFKGKSP KISETAFIAD SADVIGDIEI WDFSSVWFNA VLRGDRNKIK IGSRTSIQDN
VVIHADPENG VQIGNDVTVG HGAVLHGCRI ENNVLIGMNS TVLNGAEIGK NSIVGANALI
SEGKKFPENS LIIGVPGKVK REIKKFEIEA IAENAAEYVE FVKEYREEVK KIQKK
|
|---|
| |