| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1852 |
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| Symbol | |
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| ID | 3625368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 2315465 |
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| End bp | 2316508 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637700734 |
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| Product | hydrogenase expression/formation protein |
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| Protein accession | YP_305373 |
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| Protein GI | 73669358 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0309] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR02124] hydrogenase expression/formation protein HypE |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.138708 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCAA ATACCATTTC TCTTGAGCAC GGTGCAGGCG GAGAAGTTAT GCAGGCACTT
ATAGGAGAAA TAATTCTTAA AAACTTTCAC AATAAAAGTG CAGGCTCAAT TGGACTTGAA
TGTCTTGATG ATGGGTCCAC GGTCAGGCTT GAAGACTTCA ACAATGGATG CGAACTCGTA
ATGACTACTG ACAGTCATGT GATTACACCT GCCTTTTTCC CGAATACCAA TATAGGAAGG
CTTGCAGTTG CAGGCACTGT CAATGACCTT ACGGTTATGG GAGCAAAGCC CCTTGCCCTT
ACCTGTGCAG TCATAGTCCC TGAAGGTTTT CCACTCAAGG AATTTGAGGA AATTATTAAA
ACAATGGACA AAACAGCTGC GGAAGTTGGT GTACCCATAA TAACGGGCGA TACTAAAACC
ATGGAGAAAA CTGCGCTTGA TTCGATTATC CTGAACACTG CAGGCCTGGG GATTACGGAT
AGCCCTGTAA GAGACTCAGG ACTTCAGCCC GGAGACAAAA TTCTGGTCAC AGGCACTATT
GGCGACCACG GAATCTCGCT TATGGCTCAC AGGGAAGGTT TTGACTTTGA TACCGACCTT
GCCTCGGACT CAGCCCCACT CTGGAAACTC ATAGAACCCC TCCTGAAACT CAGAACTCCG
GAGGGCAAAC CCGTAATTAC GGCAATGAAA GACCCGACCC GCGGAGGTCT TGCAAACGCC
CTGAACGAGA TGGCAGAAAA ATCCGGAGCA GGCATTCTTA TCGAAGAAGA CTGGATTCCT
TTCAAACCAG CTGTTTCCGC AGCCTGTGAG ATGCTGGGTC TGGATCCCCT TGAGGTTGCA
AATGAAGGAA AAGCAATTAT TGGAGTCAAA CCCGGCTTTG AAGAAGAAGT GCTTTCAATC
CTGAGGCAAC ACCCTTACGG CAGGGACGCA GCTGTTATAG GAGAAGTTAC TCCAGATAAG
AAAGAAGTGG TCCTGAGAAA CCGTTTCGGT GGCATGCGTT TTGTAGATGT ACCTGCCGGA
GACCCGATTC CCAGAGTATG CTAA
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| Protein sequence | MKSNTISLEH GAGGEVMQAL IGEIILKNFH NKSAGSIGLE CLDDGSTVRL EDFNNGCELV
MTTDSHVITP AFFPNTNIGR LAVAGTVNDL TVMGAKPLAL TCAVIVPEGF PLKEFEEIIK
TMDKTAAEVG VPIITGDTKT MEKTALDSII LNTAGLGITD SPVRDSGLQP GDKILVTGTI
GDHGISLMAH REGFDFDTDL ASDSAPLWKL IEPLLKLRTP EGKPVITAMK DPTRGGLANA
LNEMAEKSGA GILIEEDWIP FKPAVSAACE MLGLDPLEVA NEGKAIIGVK PGFEEEVLSI
LRQHPYGRDA AVIGEVTPDK KEVVLRNRFG GMRFVDVPAG DPIPRVC
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