| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1848 |
|---|
| Symbol | |
|---|
| ID | 3625364 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 2312727 |
|---|
| End bp | 2312987 |
|---|
| Gene Length | 261 bp |
|---|
| Protein Length | 86 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637700730 |
|---|
| Product | hydrogenase expression/formation protein |
|---|
| Protein accession | YP_305369 |
|---|
| Protein GI | 73669354 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0298] Hydrogenase maturation factor |
|---|
| TIGRFAM ID | [TIGR00074] hydrogenase assembly chaperone HypC/HupF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.22657 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGTATAG CTATTCCTGG AAAAGTAAAA TCCATTGTAA ATGAGAATAC TGCAACGATT
GACATGGGCG GGATCTGTAG AGATGTTAAT ATGGACCTTA TGGGAGGCGC TAATGAATCC
CAGATAGGGA AACACTTTCT TGTCCATGTT GGATATGCAA TAGCCGAAAT CTCGGAAGAA
GAAAGTGAAG AAACAATGCA CCTTCTCAGA CAGATCGCCG GACTTGAAGA GATCGATACA
CCCGAAAGCG AATCTATCTG A
|
|---|
| Protein sequence | MCIAIPGKVK SIVNENTATI DMGGICRDVN MDLMGGANES QIGKHFLVHV GYAIAEISEE
ESEETMHLLR QIAGLEEIDT PESESI
|
|---|
| |