| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1838 |
|---|
| Symbol | |
|---|
| ID | 3625296 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 2299807 |
|---|
| End bp | 2300331 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637700720 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_305359 |
|---|
| Protein GI | 73669344 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1617] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAGGG AAATCCAGGT AATCTGCGGG AACGTAAATA TCCCTAATCT TTCCGGCTTT
CTAAAATCAA TAAATTCGAT CGCTTCCGAA AATGATGTCA TTATCCAGGG TTTGAACGCA
GACCTGATAG CAGGAGAAAG GCACCTTCAT TTTGCAGTGG GAAAGGCTCT TCGGGCAATT
GCTGCGGGCA GGAATATAGC AAATGATCCC GGTATCGAAA TTATGCGGTA TGCATCAGGA
GAGAGGCAGA TTGAAAGAAG TTTTTCGATA GGGCTGCGTA AAGGGGAAAA CAATGTAGTA
TTTGTGTTGC TTGGAAAAAT GGACAATCTG GTGCCGGCTC TCCCTGCATT AAAAAAACTC
ATTACTGAAA AGCCCTGTTC CGAGCTGCTT GCCTATTCCG ATTACAAAAG ACAGGGAATT
CTTTCCGTGT TCGGCATCAC GGATGCTGAA ATTGAAGCTT CAGGAGAAGA GCACATTCCC
GAATTTGTAA TTGAGAGGGT AGCACTGGCA GATTTTGCAA AGTAA
|
|---|
| Protein sequence | MQREIQVICG NVNIPNLSGF LKSINSIASE NDVIIQGLNA DLIAGERHLH FAVGKALRAI
AAGRNIANDP GIEIMRYASG ERQIERSFSI GLRKGENNVV FVLLGKMDNL VPALPALKKL
ITEKPCSELL AYSDYKRQGI LSVFGITDAE IEASGEEHIP EFVIERVALA DFAK
|
|---|
| |