Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1809 |
Symbol | |
ID | 3625267 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 2261111 |
End bp | 2261656 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637700691 |
Product | DNA polymerase |
Protein accession | YP_305330 |
Protein GI | 73669315 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1573] Uracil-DNA glycosylase |
TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGGTGG AAGCCGGATA CGAAACTGTT ACAAAGGAGA TACTTAAATG CACCCGATGC CCACTCCATA AAAGTGCAAT CAAAAGAGTC ATAGGAAAAG GGTCCTGCAA CCCGAAAGTT TTCTTCATAG GAGAAGCCCC AGGAAAACGC GAAAATGAAA CCGGAATTCC GTTTTACGGC AGGGCAGGAA AAAAACTGGA TAAAATGATC GAGTACATGG GGCTTTCCGA AGAAGATTGG ATGGTAACAA ATACAGTCAA ATGCCACCCC CCTGAAAACC GAAGACCCAG TATAAACGAG ATAGAATGCT GTAAGCCCTT CCTGCTTTCT CAGATAATCC TGCTTAACCC GAAAATTATA ATCCTTCTTG GTAATACAGC CGAGAAGTCC TTTTGCCCCG GGAAAAAACT CGAATGGGGA GTCCCTGTGG AACATGAAGG AAGAACAATC CTGAAACTTT ACCATCCTGC AGCCCTGATT TACACCTCTT CAAAAAAAGA GATCCAACGT GCTTTCATCG ACAAAAACCG TGAGCTATGG AGCTGA
|
Protein sequence | MMVEAGYETV TKEILKCTRC PLHKSAIKRV IGKGSCNPKV FFIGEAPGKR ENETGIPFYG RAGKKLDKMI EYMGLSEEDW MVTNTVKCHP PENRRPSINE IECCKPFLLS QIILLNPKII ILLGNTAEKS FCPGKKLEWG VPVEHEGRTI LKLYHPAALI YTSSKKEIQR AFIDKNRELW S
|
| |