| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1798 |
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| Symbol | |
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| ID | 3625160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 2230485 |
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| End bp | 2234387 |
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| Gene Length | 3903 bp |
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| Protein Length | 1300 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637700680 |
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| Product | cell surface protein |
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| Protein accession | YP_305319 |
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| Protein GI | 73669304 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA TACATTATGT TTGTATGGTT GCACTGTTGA GCACAATGAT GCTGGCGGTT
GCACCGGCAT CGGCAACGAC CTGGGATGTA AGCACGGTTT CTGAATTGCA GAATGCAGCG
GCAAATGCAG GTGAAGGTGA CACAATTTTT GTGCATAATG GAAACTATAC GCTTACAAGC
ACCCTTTATC TTTACAAGTC AAATATCACA TTCACAGGAG AGAGCAAAGA AGGAGTAGTC
CTCCTTAGAG ACAATGATTT CATTACTATA GGTAGCAATG GTGGACCAGC ACCCGGATGC
ATAGTTGAGA ATATGACCTT ACTAGGCGAT ATAACATCTA CTAGTGGTGT GTTTGGTATC
AGTGTGCGTT CTCCTGACTG TACATTAAGA AACTTAATTT TACGCGATAT TCGCGATTGT
GCAGTTATAT CCTCTAACTC CGAAGATTGT AGTGGCCTTA TTATAAGCAA CTGCACATTT
GACAACTCCG GGACCGAAAA TTTTGCAATC AGTATTCTAG CCACCAATTC GATCATCGAG
AATAATGTTA TAAAAAATAA TCAGTATGCT TATGGCCCCC TTTGTGTTCA AGCTCAAAAC
GTAACGGTTT CAAACAACCT TTTCATGAAT AATCCATATG CCTTTTATCT GGTTTACGCA
GATAACTCAT TAGTCTCTGG AAATAACATG GTGTCAACTG GAAATATTCT CATATATGAC
CCCGGGGAAG CTATAGTATG GCAGCTCAAT AATTTCAGTG AAAGTATTGT GTCAAACGAA
TGGGCCGGGC CATTACCATC CGTAACTTAC TGGAACTCCA CCGAGCCAGT AGAGTACACC
TACAACGGTG CGACCTACAC CGGTTACCCG GGCAACTACT GGGGTGCTGC TTACACAGGC
ACCGACGCTG ATGGCAACGG GATAGGAGAT ACGCCTTACG AAGTACCCGG CGGTTTAGGC
ACTGACTATT CCCCACTAAT ATCTCCAAAA GAGAACTACG AGATCCTGGA ACCCCCTGTC
GCCAACTTCA ATGCAGCCCC ACTTTCCGGA AATGTACCTC TCGCAGTCCA GTTCACAGAC
CAGTCCACAG GCAGTGGGAT TTCAAGCTGG ACCTGGGACT TTGACGGGGA CGGAAACGTG
GACTCAACCG AGCAGAACCC GAGCCACACC TACAACAGCA CAGGGACTTA CACAGTCAAC
CTGACGGTCA CAGGCCAACT GGGTTCGGAC AGCAAAACAA AGGCTGACTG TATCACCGTA
AGAGAACCGG CAGAACCTCC CATCGCTGAC TTCAGTGCAG ACCCCCTTTC CGGACCTATA
CCCCTGGAAG TCCAGTTCAC TGACCTTTCC ACAGGCGAAG GGATAGACAG CTGGAGCTGG
GACTTTGATT CCAACGGAAC TGTGGATTCC ACAGAGCAGA ACCCCACCTT TACTTACAGT
GAAATCGGCA ACTACACCGT AACCCTGAAC GTTACCGGAA CAGGCGGAAG CGACAGCAAA
GTAAAGGCGG ATTACATCGT AAGCGAAGAA GCCGAACCCG CATTCCCGAC TGCAGGCTTT
TCGGCCAGCG CCAGAGACGG GGCAGTACCT TTCACGGTCA AATTCACCGA CAGTTCAGAA
AACACCATTG ACTGGGCCTG GGACTTTGAC GGGGACGGAA ACGTGGACTC AACCGAGCAG
AACCCGCTTT ACACCTACTA CACGGAAGGC AACTACACCG TCAAATTGAC CGCAAGCAAC
GGAAACGGCA GTGATGTCCT GGAAATTCCG GACATGATCA CGGTTGCTTC GGAAAGGCCC
GCACCTCCTG ATGACTCCTG GTACCAGTTC CACGGAAAGG TTGACCACCT CGGTTACTCC
GAAAACGGAC CCAAGACCAA CCGGACCGAG TGGATAAGTG AGAGTGTTAC TGATGCTATC
GGCAGTTCTT CTCCTGTTGT GGCTGAAGGG AAGATCTTTG TGATCTGCGG CGGAGCAGAA
ATAGAAGAAG AAACGACAGG CATCGTTCAG TTAGTAGCCC TGAACGAGTC TACAGGAGAC
ATAGCCTGGA ATACCAGTAT CCCGGAAACC GTATACGGTT CGTGGGCTTC CCCTGCTTAT
GATGACGGCA TGGTCTTTAC AGCAACCGGC CCTGAACTTG GCTGTTACAA CGCCGAAACA
GGAGAAAAAA TCTGGTGCTT CAATGATACT GTGGGAACTC TGGGTGCGGT TAATGGCGGG
CCTGCTATCG CGGACGGGAT GGTGATCTTC AGTGACTGGG ACGGGCACCA TTATTACTGT
CTTGACGAGT ACACCGGATA CCTGCTATGG AGTTTTGTAG TGGTAGGAGA CGCTCAGTCC
GTACCTGCCT ATGCAGACGG GAAGTTCTAC CTGACAGGCT GGACTTACAC GCAGGGGTAT
GCTTACTGCG TGGACGCGAC AACCGGGGAA CAGCTCTGGA CAATTAATGT CGAACGCAGC
TTCTGCGGGT CCCCTGCCTA TAAAGACGGG GTCCTCTACC TGACAACCTA CAACTTCTCT
GGAGACGGTG ACCTCTTTGC CCTGAACGCT ACGGACGGGA GCATAATCTG GCAGCAGACC
GTCCAGAGGA CGGACTCGAC CCCGGCTCTT GCCTATGGAA ATGTTTATGT TAGCGGAGGG
TGCAGTGGTT TTAGCGACAA GGAAACCTAC TGTTTTAATG CGACTACAGG CGAACCTGTC
TGGTCAATCC CCTCAATCGG AGACTGGACC TGGTCGGTAG CTGTCGCCGA TGGGCTCGCT
TATGTGGGAG GTTATGCTCT GGATGCCTTT ACAGGGGATG TCGTCTGGAA TTCTCCTTAT
GGCGGCGGTA CTCCGGCACT TTCAGACGGT ATGTTTTTCA GTATAGGGAG CAGTAAGAAA
GTCTATGCCT TCAAGGACTC ACTCTCTTCA CCTATTGCCA ACTTCTCTGC AGACATGACA
TCAGGCAATG CACCATTGAC AGTCAATTTC ACCGACCAAT CCACAGGTAC ACCGACCTCC
TGGCTCTGGG ACTTCGGGGA TGGTACTAAC GTTACCGAGC AGAACCCTGC TCACACTTAC
ACTGCAACCG GTACCTACAC TGTCAACCTT ACGGTTTCCA ACGAGGATGG AAGCGATTCG
GAGGTAAAAA CTGGGTACAT TAAGGTCTCC AGTCAATCTT CAGCAAAGCC AGTAGCTGCA
TTTTCTGCAT CTCCTACTTC AGGAAAAACA CCATTAAACG TTACCTTTAC TGACACAAGC
ACTGGATCCC CAACTTCCTG GTTCTGGAAC TTTGGAGACG GGTCAAAGTC ATTCCTACAG
AATCCGGTTC ACAAGTATTC TAAGGCAGGA ACATATACTG TTAACTTGAC AGTAAAGAAT
GCTAAAGGCA AGAACACGGT AACAAAAACA CAATATATAA AAGTGATAAC AAAACCTGTG
GCAAACTTTT CTGCGAGTCC AACATCAGGA AAAGCACCAT TAAAGGTTAC TTTTACTGAC
ACAAGCACAG GAATACCTGC TAAATGGAGA TGGGACTTTG GAGACGGAGC AAAGTCATTC
CAACAGAATC CGATTCATAA GTATTCTAAG GCAGGAACAT ATACTGTTAA CTTGACAGTA
AAGAATGCTA AAGGCAAGAA CACGGTAACA AAAACAGAAT ATATAAAAGT GATAACAAAA
CCTGTGGCAA ACTTTTCTGC GAGTCCAACA TCAGGAAAAG CACCATTAAA GGTTACTTTT
ACTGACACAA GCACAGGAAT ACCTGCTAAA TGGAGATGGG ACTTTGGAGA TGGATCAGAT
TCATTCCACC AGAACCCGAT TCACAAGTAT TCAAAGGCAG GAACATATAC TGTTAACTTA
ACAGTAAAGA ATGTTAAAGG CAGCAACACG GTAACAAAAA CAGAATATAT AAAAATTACA
TAA
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| Protein sequence | MKKIHYVCMV ALLSTMMLAV APASATTWDV STVSELQNAA ANAGEGDTIF VHNGNYTLTS
TLYLYKSNIT FTGESKEGVV LLRDNDFITI GSNGGPAPGC IVENMTLLGD ITSTSGVFGI
SVRSPDCTLR NLILRDIRDC AVISSNSEDC SGLIISNCTF DNSGTENFAI SILATNSIIE
NNVIKNNQYA YGPLCVQAQN VTVSNNLFMN NPYAFYLVYA DNSLVSGNNM VSTGNILIYD
PGEAIVWQLN NFSESIVSNE WAGPLPSVTY WNSTEPVEYT YNGATYTGYP GNYWGAAYTG
TDADGNGIGD TPYEVPGGLG TDYSPLISPK ENYEILEPPV ANFNAAPLSG NVPLAVQFTD
QSTGSGISSW TWDFDGDGNV DSTEQNPSHT YNSTGTYTVN LTVTGQLGSD SKTKADCITV
REPAEPPIAD FSADPLSGPI PLEVQFTDLS TGEGIDSWSW DFDSNGTVDS TEQNPTFTYS
EIGNYTVTLN VTGTGGSDSK VKADYIVSEE AEPAFPTAGF SASARDGAVP FTVKFTDSSE
NTIDWAWDFD GDGNVDSTEQ NPLYTYYTEG NYTVKLTASN GNGSDVLEIP DMITVASERP
APPDDSWYQF HGKVDHLGYS ENGPKTNRTE WISESVTDAI GSSSPVVAEG KIFVICGGAE
IEEETTGIVQ LVALNESTGD IAWNTSIPET VYGSWASPAY DDGMVFTATG PELGCYNAET
GEKIWCFNDT VGTLGAVNGG PAIADGMVIF SDWDGHHYYC LDEYTGYLLW SFVVVGDAQS
VPAYADGKFY LTGWTYTQGY AYCVDATTGE QLWTINVERS FCGSPAYKDG VLYLTTYNFS
GDGDLFALNA TDGSIIWQQT VQRTDSTPAL AYGNVYVSGG CSGFSDKETY CFNATTGEPV
WSIPSIGDWT WSVAVADGLA YVGGYALDAF TGDVVWNSPY GGGTPALSDG MFFSIGSSKK
VYAFKDSLSS PIANFSADMT SGNAPLTVNF TDQSTGTPTS WLWDFGDGTN VTEQNPAHTY
TATGTYTVNL TVSNEDGSDS EVKTGYIKVS SQSSAKPVAA FSASPTSGKT PLNVTFTDTS
TGSPTSWFWN FGDGSKSFLQ NPVHKYSKAG TYTVNLTVKN AKGKNTVTKT QYIKVITKPV
ANFSASPTSG KAPLKVTFTD TSTGIPAKWR WDFGDGAKSF QQNPIHKYSK AGTYTVNLTV
KNAKGKNTVT KTEYIKVITK PVANFSASPT SGKAPLKVTF TDTSTGIPAK WRWDFGDGSD
SFHQNPIHKY SKAGTYTVNL TVKNVKGSNT VTKTEYIKIT
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