| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1777 |
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| Symbol | |
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| ID | 3626260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 2183680 |
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| End bp | 2186478 |
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| Gene Length | 2799 bp |
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| Protein Length | 932 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637700656 |
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| Product | replicative DNA polymerase I |
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| Protein accession | YP_305298 |
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| Protein GI | 73669283 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
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| TIGRFAM ID | [TIGR00592] DNA polymerase (pol2) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.227569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTATGG ATTTCCAGAT CTTGGATGCA GACTATGAAG TCATTAATGA CAGCAGCCCC
GTAATCCGTC TCTTTGGCAG GGGAGTGGAC GGGAAGAGCG TTTGCTGTTT TGTTCCCGAT
TTTGAACCTT ATTTTTATCT CAAGGCCTCT GGAGACCTTA ATGCCGTAGC CAGGCTTATC
GAAGAGACTT TCACGCAAGT TAAAAAAGTA GAAATTGTTG AAAAATTCGA GCCTATTGGG
TATCAGAAAA CAAAAATAAA GATGCTCAGG GTTACTACCC ACCTGCCCAG AGAGGTGCCC
GAAATCAGGG ACGAGATTCT AAAGCTCCAG GAAGTACTGA AGGCTGAAGG CAAATGGGAA
GTCTATGAGA CTGATATTCT CTTTAGAAAT CGTTTTTTAA TTGATAAAGA TCTCGGAGGT
ATGGTCTGGG TATCTGCAGA AGGGGAAGCC GTTGACCCTG CAAAATATCT CCGTACAAAT
GGTTCAGGCA GTTCTCGCTG TGGGAAGTTT ACATGTGATG CTTCAATCCT TGCATCCGGG
TTAAATAAAG TTGAAAATCT TACTCTCGCC CCCCTGAAGT ATCTGGCTTT TGATATTGAA
TGCCTGCCTC TTGATGGAGG AATGCCTTCT CCTGAGGTTT CGCCTATAAT CATGATTAGC
TTTTCTTTCG AGCCTGAGTA TAAAGGACAT AAAACCCTCG TACTTCTGGC AAAACCTGTG
GAAAATCTGA ATTCCGATGT TTGGTCTTAC ACGGACGAGA CCGAAATGTT AAATAAGTTT
TTCGAGATCT TCTGCGATTA TGACCCTGAC ATTGTAATTG GATATAATCA CCAGGATTTC
GATATTCCTT ATATAACGGA TAGAGTAAAA ACTCTGGTTT CAGAAGGGAA CTCAATAAAC
CCTGTTGTCG GCCGGGACGG CAGCAAAATA GGTTACAGAA AATTCGGGCT TATTACTCGC
ACTGAAATGA AGGGCCGGGT GGTTGTGGAT GCGCTTCCTC TGGTAAGAAG AGCTTTCAGT
CTGAAGCAGT ACACCCTGCG AGCGGTTTCA AAGGAACTCC TGAGCCGTGA AAAACTGGAT
GTTCCCCCTC TTGAAATGGA AGAGTACTGG CTCGATACAG GGGAAAAATT CAAAAAATTC
GTTGACTATT CACGCAGGGA TGCAGAGCTT GCCCTGGAAC TTATCCTTAA TTTGAGACTC
CTTGACAAAT ATGTGGCCCT TGCCCAGGTA AGCGGAAGCC TGCTTCAGGA AGTTGTTGAT
GGAGGCCAGA CTTCGATGGT TGAAACTCTT CTTCTCAAAG AATTTGGGCT ACGCGACAGA
GTTCTACTTC CAAAGCCTGA TGATGGAGTT TCGGCCGAGA GATATGCAAT GAGTTCCGAC
CTCAAGGGTG GGGAAGTCCT GGAACCTAAG AAGGGCCTTC TGGAAAATGT GCTTATTCTT
GACTACAAGT CTCTTTACCC AACTATAATG ATGGCACATA ACCTGTGTTA CACTACAGTA
GTTACGGGTG ATAAGTCTGA TGGGGTGACT ATCAGGCCTC CATCCGGAGG AGAGTTCGTG
CCTTCCGAGG TTTTCAAGGG AATCGTGCCT TCGATCCTTG AAGATTTGCT TAACAAGAGG
ACACAGACAA AGAAAAGGAT GAGAGGGACT TCTAATGAAA ATGAGTATAG GGTACTTGAT
GCTACTCAAC TCGCCCTGAA AATCCTGTTA AACAGCTTTT ATGGTTATTC CGGATATGCC
AGGGCAAGGC TCTACAGCCT GACTCTTGCA AACGCTGTAA CCAGCTTTGG AAGAAGCAAC
ATCCTCAATA CGCGGGAAAT TATCAACAAC ACTATAGGTA AAATAATTCT CAGGAATAAA
ACAGCTCTGC TCCTTGATGA AGCAGGAGAA CTCTCTCCCC AGGATAGGGT AGTTGAACTG
TCGGTTGCCT ACGGAGATAC TGACAGTGTC TTTGTCCACT GTAAATCTAG AGGAGACCTC
TCTCTTGAGG AGGTTAGCCT TATAGGTAAC AGGCTTGCAA ATATCGTTTC TGTGTCTTTG
CCTGACCCGA TGGAACTTGA ATTCGAATCT ATTGCTAAGC GTGCCCTTCT TATCGCAAAA
AAACGCTATG CTCTCTGGTT TTTTGAGCCA AAAAATTCAG GTTGGGAAGA TAAGATTAAG
GTTAAAGGCA TGGAAACCGT CCGAAGAGAC TGGTGTGAAT TAACTTCGGT AACTCTCAAT
AGGGTGCTTG AGCTTGTGCT TATAAAAGGT GATGTTGACC AGGCTGTGGA ATACGTACGC
CAGATAGTCA GCAAGGTCAG GAATCTCGAT CCTGCAAAAG ACTCCGAGAT TATCGAAAGC
CTTGTTCTCA CACGCACCCT TACAAGGAAA ATTGAGAGTT ATAAGAACAA GCAGCCTCAC
CTTACGGTTG CTGAAAATCT GAAAAAAAGG ACTGGTGTCG TTCCTTCTAT AGGAACAAGA
ATACCTTTTG TCATTACCGC AGGAAAAGGA CTCTTTGTTG ATCGGGCTGA AGATCCGGAC
TATGTAAGGG AGAAAAACAT CCCGATAGAT GTCGATTACT ATATTAAGAA ACAGATACTC
CCCCCGGTGG AACGTATTCT TGAAGTTTTT GGGGTTAAGA TGTCTTCACT CGACTTTGAT
TCCAAACAAA AAGGACTATT TGATTTTGAA GCTAAGAAGC CTGAAGTAAA GAAACAGGAT
AAGCCTTCTT CAGAAAAGGA AAGTAAGGTA AAGGCTCAGG AACAGAATCT ATTTAAGGAA
AATGGACATG CAGCTCAGAG TTCTCTCTTC GATTTCTGA
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| Protein sequence | MPMDFQILDA DYEVINDSSP VIRLFGRGVD GKSVCCFVPD FEPYFYLKAS GDLNAVARLI
EETFTQVKKV EIVEKFEPIG YQKTKIKMLR VTTHLPREVP EIRDEILKLQ EVLKAEGKWE
VYETDILFRN RFLIDKDLGG MVWVSAEGEA VDPAKYLRTN GSGSSRCGKF TCDASILASG
LNKVENLTLA PLKYLAFDIE CLPLDGGMPS PEVSPIIMIS FSFEPEYKGH KTLVLLAKPV
ENLNSDVWSY TDETEMLNKF FEIFCDYDPD IVIGYNHQDF DIPYITDRVK TLVSEGNSIN
PVVGRDGSKI GYRKFGLITR TEMKGRVVVD ALPLVRRAFS LKQYTLRAVS KELLSREKLD
VPPLEMEEYW LDTGEKFKKF VDYSRRDAEL ALELILNLRL LDKYVALAQV SGSLLQEVVD
GGQTSMVETL LLKEFGLRDR VLLPKPDDGV SAERYAMSSD LKGGEVLEPK KGLLENVLIL
DYKSLYPTIM MAHNLCYTTV VTGDKSDGVT IRPPSGGEFV PSEVFKGIVP SILEDLLNKR
TQTKKRMRGT SNENEYRVLD ATQLALKILL NSFYGYSGYA RARLYSLTLA NAVTSFGRSN
ILNTREIINN TIGKIILRNK TALLLDEAGE LSPQDRVVEL SVAYGDTDSV FVHCKSRGDL
SLEEVSLIGN RLANIVSVSL PDPMELEFES IAKRALLIAK KRYALWFFEP KNSGWEDKIK
VKGMETVRRD WCELTSVTLN RVLELVLIKG DVDQAVEYVR QIVSKVRNLD PAKDSEIIES
LVLTRTLTRK IESYKNKQPH LTVAENLKKR TGVVPSIGTR IPFVITAGKG LFVDRAEDPD
YVREKNIPID VDYYIKKQIL PPVERILEVF GVKMSSLDFD SKQKGLFDFE AKKPEVKKQD
KPSSEKESKV KAQEQNLFKE NGHAAQSSLF DF
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