Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1773 |
Symbol | |
ID | 3626256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 2177163 |
End bp | 2178713 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637700652 |
Product | hypothetical protein |
Protein accession | YP_305294 |
Protein GI | 73669279 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.659619 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAAGA GTAGTGTTGG GCTGATAACT ATATTGTTAT TTCTATTTTT AGTTTCTTCG GGATGCGAAT CTTCACATAC TGTAGCCTCC GGTGAAAATG GGAATAAAGA TAGTGAAGAG ATATTAAAAA GTGATAGCGT TCAGGAAAGC AGCCAGCTGA GTCAGGAAAA TCTAACATCT TCAGAAAAAT CATCTCCTTA CCTTTACTGG GAGTATGAAC TTGGAGATAT AACTCCAGAA AATATCAATG AAGGAAAATC GAATGTTCAG GACTGTGTAA CATACTCTCA GGACGGAAAA TATGTAGCTG TTGGGACAGG AAAAAAACTG ACAGTTATTG ATGTACCAGA CAAAAAAATA TTATGGGAAA AAACCTTAGG AGGAAATGTT TCCGACATTT CGTTTTCAAA AGACGGAAAG TATCTGCTTG CAGGGGAAAA AAGTACTGAC GGATACATCT ATTCTCTGGA TGCTGGCACA GGAAATGAAA TTCACAGCTA TAGAAGCGCC GATGACCTGG GAACCAGTAC GAACTCAAAA TATCAGCCCT GCATATATAA AATAACAGCT GCTGATGATG CTGTATACAT TGCAGCGGGT CGATACTGGA AAGAGTCAGG GTACGGGCTG GCTTCAAGGG TATACAGATT CAACCCGGAT GGCAATCTTT CCTGGAAACT GCCAGCAAAT GAAAACTATG CGCAGAGTGT AAACTGGATC GACTCAAGCC AGGACGGAAA AAATGTGGTT TTTTCAACCG GAGACTGGAC AAATTCCCTT GGACTTGATA CAGTCGTCTA TTCTGTGGAT GACAGCGGAA ATCTCCGTTG GGAATATGAA ATTCTCCCTC TTAAGCCTTA CTTTGTTTCA GCAGCCATCT GGCACGGGCT TGATATTTCA GATGATGGGT CCATGGTAAC TGCCTATACT GGTGATGGAA GAAAATACCT GTTTTATGAT TCCGAGATGA CGAAACCGGG AGACGGAAAA ACAGCATGGG ACATGAAAAC CCCTGGAGAC GGGAGGACAT CATGGGACAC CTATGATTGG CAATCCAATG TAACAGTTCC AGAAGAGATA GAGGGAAGTT ACATCTATGC CTATGGGGAA GCTGCAAAAA TTTCCAGTAA AAATGAGACA CTTTACCTTA CAGGAGCCAC ACTTCCTGCA TATTATCCCG ACAAAATATC GGTAGCATAT CCCCTTGAGA ATACTCTTAT ATCAAGTGAT GTTGAGAAAG GAGACACTTC ATGGACTTAT TCCCTTGGAG GACGTTGTGC AGGGATTTTC TTTTCTCCAG ACACCAAATT CTTTGTCCTG CCAGTCGGGA AAGACTCTTC CTCAGGCGAT ACTCAAGTTC AAGGAATTCA TGTTTTTGAC AACCAGAAAT CCGGAAACGG AAATTCAAGG TTAATCTGGA AATATAACAC TGAGGGCGTT GTTGTAGATG CTGCGATTTC TTCCGACTGC ACAGTTGCTG CAGTTGAAGC CCCTCTAAAG CTTGAAAATG GAGATATAAT TGGAAAGCAC AGGTTAATAA TTGTCAGGTG A
|
Protein sequence | MKKSSVGLIT ILLFLFLVSS GCESSHTVAS GENGNKDSEE ILKSDSVQES SQLSQENLTS SEKSSPYLYW EYELGDITPE NINEGKSNVQ DCVTYSQDGK YVAVGTGKKL TVIDVPDKKI LWEKTLGGNV SDISFSKDGK YLLAGEKSTD GYIYSLDAGT GNEIHSYRSA DDLGTSTNSK YQPCIYKITA ADDAVYIAAG RYWKESGYGL ASRVYRFNPD GNLSWKLPAN ENYAQSVNWI DSSQDGKNVV FSTGDWTNSL GLDTVVYSVD DSGNLRWEYE ILPLKPYFVS AAIWHGLDIS DDGSMVTAYT GDGRKYLFYD SEMTKPGDGK TAWDMKTPGD GRTSWDTYDW QSNVTVPEEI EGSYIYAYGE AAKISSKNET LYLTGATLPA YYPDKISVAY PLENTLISSD VEKGDTSWTY SLGGRCAGIF FSPDTKFFVL PVGKDSSSGD TQVQGIHVFD NQKSGNGNSR LIWKYNTEGV VVDAAISSDC TVAAVEAPLK LENGDIIGKH RLIIVR
|
| |