| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1748 |
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| Symbol | |
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| ID | 3625793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 2142534 |
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| End bp | 2143457 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637700627 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_305270 |
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| Protein GI | 73669255 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0039] Malate/lactate dehydrogenases |
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| TIGRFAM ID | [TIGR01763] malate dehydrogenase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.747056 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAAAA TTTCCGTGAT TGGTGCAGGA AACGTAGGGG CAACTACAGT CCAGCGACTA
GCTGAACTTG AACTTGGCGA AATTGTCATG ACGGATATTG TGGAAGGACT ACCACAAGGA
AAAGCACTCG ACCTTATACA GGCAGGGGCA ATAAAAGGTT ATGATACGTC AATAATTGGG
ACCAACGATT ATGCAGAAAT CGTAGACTCT GATCTTGTAA TAATTACAGC AGGGATTGCA
AGAAAACCTG GGATGACTCG GGAAGATCTG ATTAAAACGA ATTCTAAAAT AATAGCAGAG
GTTTCCAGAA ATATTGCAAA GTATGCTCCA GACTCCATAG TAATTAATGT CACAAATCCG
CTTGACATTA TAACGTACAT AGCTATGAAA TCAACAGGAT TTGAGACAAA GAAAGTATTC
GGAATGAGCG GAGTTCTGGA TTCGGGACGT TTTGCAAGCT TTATTGCAGA AGAACTGAAG
TGTTCAAAAA AAGATGTTCA GGCAATGGTT ATAGGTGGTC ATGGAGATCT GATGGTGCCT
CTTCCTCAAT ATACAACAGT GTCAGGAGTT CCACTCACGG ACCTGCTTCC GGGGGATAGA
ATTGCCAGGC TGGTAGAGAG GACAGTAAAC GGAGGAGCAG AGATCGTAGA GCTCCTTAAA
CAGGGCAGTG CTTTTTATGC ACCGTCCGCG GCTATTGTCT CAATGGCGGA AGCCGTTATT
AAAAATTCAA AGAGAATTTT GCCTGCTTCG GCTTATCTTG AAGGACATTA CGGACAGGAA
GGTATTTACT TCGGTGTACC CGTAAAGCTT GGGGCATCAG GAGTAGAAGA AATCCTTGAA
CTCAAGCTCG ATGAAAGCCA GTACGAGACT CTCAGAAAAT CCTCGGAAAC TATTCGAAAC
ACGATTTCAC AGCTAGAAAT ATAA
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| Protein sequence | MAKISVIGAG NVGATTVQRL AELELGEIVM TDIVEGLPQG KALDLIQAGA IKGYDTSIIG
TNDYAEIVDS DLVIITAGIA RKPGMTREDL IKTNSKIIAE VSRNIAKYAP DSIVINVTNP
LDIITYIAMK STGFETKKVF GMSGVLDSGR FASFIAEELK CSKKDVQAMV IGGHGDLMVP
LPQYTTVSGV PLTDLLPGDR IARLVERTVN GGAEIVELLK QGSAFYAPSA AIVSMAEAVI
KNSKRILPAS AYLEGHYGQE GIYFGVPVKL GASGVEEILE LKLDESQYET LRKSSETIRN
TISQLEI
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