Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1746 |
Symbol | |
ID | 3625791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 2140925 |
End bp | 2141656 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637700625 |
Product | hypothetical protein |
Protein accession | YP_305268 |
Protein GI | 73669253 |
COG category | [S] Function unknown |
COG ID | [COG4021] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.484856 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGACC GAGAAATTTA TGCTGAGATG CGCTGTATCC CTCCTGTGGT TGTGCGCGCG GACGGCAGGA ATTTTAAAAA CACACTTAGA GACCTGGGCT TTGGAAAACC TTATGATCAA ACTTTCGCCA GGGCAATGGC GGATACTGCT GAACTTTTTA TTAAGAAAAG TGGTTTAAGC CCTCTCTTTG CCTACACTTT TTCGGATGAA GTTAGTTTTC TTTTTATGGA ACTTCCCTTT GAGGGAAGAG TAGAAAAAAT GGACTCTGTC ACGGCAAGCT TTCTGGGAAG TGCACTTACA ATAAATTTGC AGTTTGAAAA ACCTGTGGCT TTTGACTCCA GAATAGTGGT TCTTCAAAAA GATGAGATTC CTGCGTATTT TCACTGGAGG CAGCTTGAAG CCTGGCGTAA TTTTGTGGCA GCCTGGGGAT ATTATACGTT GCTAAATGAA GGAATAAGTA AGATTGAGGC TTCGAAATAT CTCAGAGGAA AAAAAGAATG GGAAATCCAT GAAATGCTTT TTGAGAGAGG AATCAATCTT GCAAAGATTC CTGCCTGGCA GAGGAGAGGA GTCATTATTT CAAAAGAAGA ATACGAAATC TCTGGCTTTA ATCCTGTACT TGACAAAGAG ACAAAATCTC TGCGCAGAAG GATCATTCAA AACTGGGAAA TCCCGAATTT TAAATCCGAA GAAGGTATGG AGTTTTTACA GAAACTTATT AATAGGAATT AA
|
Protein sequence | MKDREIYAEM RCIPPVVVRA DGRNFKNTLR DLGFGKPYDQ TFARAMADTA ELFIKKSGLS PLFAYTFSDE VSFLFMELPF EGRVEKMDSV TASFLGSALT INLQFEKPVA FDSRIVVLQK DEIPAYFHWR QLEAWRNFVA AWGYYTLLNE GISKIEASKY LRGKKEWEIH EMLFERGINL AKIPAWQRRG VIISKEEYEI SGFNPVLDKE TKSLRRRIIQ NWEIPNFKSE EGMEFLQKLI NRN
|
| |