Gene Mbar_A1746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1746 
Symbol 
ID3625791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2140925 
End bp2141656 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content40% 
IMG OID637700625 
Producthypothetical protein 
Protein accessionYP_305268 
Protein GI73669253 
COG category[S] Function unknown 
COG ID[COG4021] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.484856 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGACC GAGAAATTTA TGCTGAGATG CGCTGTATCC CTCCTGTGGT TGTGCGCGCG 
GACGGCAGGA ATTTTAAAAA CACACTTAGA GACCTGGGCT TTGGAAAACC TTATGATCAA
ACTTTCGCCA GGGCAATGGC GGATACTGCT GAACTTTTTA TTAAGAAAAG TGGTTTAAGC
CCTCTCTTTG CCTACACTTT TTCGGATGAA GTTAGTTTTC TTTTTATGGA ACTTCCCTTT
GAGGGAAGAG TAGAAAAAAT GGACTCTGTC ACGGCAAGCT TTCTGGGAAG TGCACTTACA
ATAAATTTGC AGTTTGAAAA ACCTGTGGCT TTTGACTCCA GAATAGTGGT TCTTCAAAAA
GATGAGATTC CTGCGTATTT TCACTGGAGG CAGCTTGAAG CCTGGCGTAA TTTTGTGGCA
GCCTGGGGAT ATTATACGTT GCTAAATGAA GGAATAAGTA AGATTGAGGC TTCGAAATAT
CTCAGAGGAA AAAAAGAATG GGAAATCCAT GAAATGCTTT TTGAGAGAGG AATCAATCTT
GCAAAGATTC CTGCCTGGCA GAGGAGAGGA GTCATTATTT CAAAAGAAGA ATACGAAATC
TCTGGCTTTA ATCCTGTACT TGACAAAGAG ACAAAATCTC TGCGCAGAAG GATCATTCAA
AACTGGGAAA TCCCGAATTT TAAATCCGAA GAAGGTATGG AGTTTTTACA GAAACTTATT
AATAGGAATT AA
 
Protein sequence
MKDREIYAEM RCIPPVVVRA DGRNFKNTLR DLGFGKPYDQ TFARAMADTA ELFIKKSGLS 
PLFAYTFSDE VSFLFMELPF EGRVEKMDSV TASFLGSALT INLQFEKPVA FDSRIVVLQK
DEIPAYFHWR QLEAWRNFVA AWGYYTLLNE GISKIEASKY LRGKKEWEIH EMLFERGINL
AKIPAWQRRG VIISKEEYEI SGFNPVLDKE TKSLRRRIIQ NWEIPNFKSE EGMEFLQKLI
NRN