Gene Mbar_A1742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1742 
Symbol 
ID3625787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2132837 
End bp2134432 
Gene Length1596 bp 
Protein Length531 aa 
Translation table11 
GC content37% 
IMG OID637700621 
Producttransposase 
Protein accessionYP_305264 
Protein GI73669249 
COG category[L] Replication, recombination and repair 
COG ID[COG5421] Transposase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.12588 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.422526 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGTTA CAACACGTTC TCTTGATCAT CACGGAATCG TTTCTGGCAT TTACGATGAA 
CTTGAAATTG GAAAAGTGAT TGATGAAGTG CTGCCCAAGT TTGGGCAGCA CAAGTTAGCT
CACTCTATTG TAGTAAAGGC AATGATTCTT AACTGTCTTG GTTTCGTAGA CAGTCGTCTT
TACATGTACT CTCAGTACTT TGAAACCCTT CCTGTTGAAC GGCTTCTTGG CCCCGAGATC
AGTGCTTCTG ACCTTACTGA TGATGTTTTA GGTCGAACTC TTGACGCAAT ATATGAAGCA
GATCCTACTC AACTTTTCAT GAAGCTTTCC TTGAAAATGC TGGAAATTGT TAACATCAGA
ACTCAACTTC TCCAATCTGA CACCACTAAT TTTAGCCTTC ATGGAGATTA CAATTATATC
AATGACGGTT CTGTCATCGA AATTACATAT GGTCACGCAA AAGACGGTAG AGATGACCTG
AAACGTTTTG GACTTGGAAT GATAACAAAT CAGTATGGAA TTCCACTATT TGCAAAAGCT
TACTCTGGTA ACGCATCAGA CAAAGAAACC ATCATAGAGG CAATGAAAAT ACTTCAAGAA
AACATAACGT TTCCTGATGA TGTTTACTAC ATAGCTGATA GTGCTCTATA TTCTGAAGGA
AACATCAAAG CAATGATAGA AGGCATGAAG TGGATTACTC GTGTTCCTTC AACACTAAAC
CTTGCAAAAA ACTTGTTGAT TTCTGATCTT GAGTTCAAAA ACGGAGAGGA TCCACGCTAT
TCATTTTACG AAACTATTGT TGAATATGGT GGTATAAAGC AAAAATGGGT AGTTGTTTAT
TCCACAGAAA TGCAGAAAAG AAAAGACATT ACTTTTGAAA GAAAAATTCA AAAGAAGGTT
AATGAATCCC AGAAAGATCT CAAAGACCTC AAAAAGATCA AGTTTGCTTG TGAAAAGGAT
GCCATAGCAG CTTTGGAAAG ATGGAAGAAA GAGAACCCTC ATTGTTTGCT GGAAACCGTA
GAGATTTCCA CGGTTTCAAC AAAGGAAAAC GGTAAAATAG GAAGACCAAA GAAGAATGAA
AAGCCTATTA TTCACTATGT TGTAAATGCA AAAGCAGTCC GAAACTACGA AATAGAATTG
AATGAAAAAG AGTATCAAGG AAGATTTATA ATCGCAAGTA ACGATCTCAA TCTTGATGCT
GAAAAGATGC TGGAATACTA CAAGAACCAG AGCAAGGTCG AAAAAGGTTT CAGGTTCATA
AAGGATAAAA GTTTCAGGGT TTCCGAGGTT TATTTGAAAA AACCTCAAAG AATTGAAGCT
CTCTCAATGA TAATGGTGTT AACTCTGATG GTCTATTCGG TAGCGGAATG GCAGCTGAGA
GAGAAGCTAA AAGAAACAGG GGAAACAATA CCGAATCAGG TTAAAAAGCA AACACAAAAG
CCCACTTTGA AGTGGGCTTT TGTGCTGATG AGGGGAATTA CAGAAGTAAA AGTGGAAGTT
GATTCAAAGG TGATAACCAA AATTGCCAAC ATGGATGAAA TTAAGAGCAA GATAATAAGG
TTGATGGGGA AAAATTGTGA AAAATACTAC TTTTGA
 
Protein sequence
MLVTTRSLDH HGIVSGIYDE LEIGKVIDEV LPKFGQHKLA HSIVVKAMIL NCLGFVDSRL 
YMYSQYFETL PVERLLGPEI SASDLTDDVL GRTLDAIYEA DPTQLFMKLS LKMLEIVNIR
TQLLQSDTTN FSLHGDYNYI NDGSVIEITY GHAKDGRDDL KRFGLGMITN QYGIPLFAKA
YSGNASDKET IIEAMKILQE NITFPDDVYY IADSALYSEG NIKAMIEGMK WITRVPSTLN
LAKNLLISDL EFKNGEDPRY SFYETIVEYG GIKQKWVVVY STEMQKRKDI TFERKIQKKV
NESQKDLKDL KKIKFACEKD AIAALERWKK ENPHCLLETV EISTVSTKEN GKIGRPKKNE
KPIIHYVVNA KAVRNYEIEL NEKEYQGRFI IASNDLNLDA EKMLEYYKNQ SKVEKGFRFI
KDKSFRVSEV YLKKPQRIEA LSMIMVLTLM VYSVAEWQLR EKLKETGETI PNQVKKQTQK
PTLKWAFVLM RGITEVKVEV DSKVITKIAN MDEIKSKIIR LMGKNCEKYY F