Gene Mbar_A1740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1740 
Symbol 
ID3625785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2131312 
End bp2131731 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content44% 
IMG OID637700619 
Producthistidine triad protein 
Protein accessionYP_305262 
Protein GI73669247 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.458061 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGAAG ACTGCCTTTT TTGTAAAATA ATAGAAGGAA AAATTCCTTC GGAGAAAGTA 
TACGAAGATG CTGCCGTTTT TGCATTTCTT GATGTCTTTC CGGCAAGTGA AGGGCATACG
CTGGTAGCTC CTAAAAAACA TTTCAGCAGG TTTACGGATA TGGATACGGA AAGTGTTGCT
TCGCTTTTTG AGGCTGCAAG GAAGATTACG GCTGCAGTCG AAAAGGCATT TTCGGCAGAG
GGATCAAACA TCGGAATCAA TGATGGAAAA GTCGCTGGAC AGGAGATTCC CCATGTACAT
GTACACGTTA TTCCCAGAAG AAAAGGAGAC GGCGGGAGAG GGATAAAATC AGTAGTATGG
ACCGAGCCTG ATACTGCCAA TTTGAAAGAA GTTGCGGAAA AAATCAGGAG AGCGCTTTGA
 
Protein sequence
MTEDCLFCKI IEGKIPSEKV YEDAAVFAFL DVFPASEGHT LVAPKKHFSR FTDMDTESVA 
SLFEAARKIT AAVEKAFSAE GSNIGINDGK VAGQEIPHVH VHVIPRRKGD GGRGIKSVVW
TEPDTANLKE VAEKIRRAL