Gene Mbar_A1731 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1731 
Symbol 
ID3626770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2120171 
End bp2121301 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content40% 
IMG OID637700610 
ProductN-acetylglucosaminyl-phosphatidylinositol biosynthetic protein 
Protein accessionYP_305253 
Protein GI73669238 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.183221 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAC ACAAAATTGC AATGATCAGT GATTGGTATT TTCCAAAGGT AGGAGGAATC 
GAGTATTCAA TGCACACCCT TGCTAAAACC TTGAGCATGC ATGGATATGA GGTGAGCGTT
ATTACAAGAA GCTATCCGGG TGTTCCTGAA TACAGTAAAA GGGATGGAGT ATCAGTGATA
AGGCTCAAAG GTAGACCTTT GCCAGGACAG AGTCGATTTC TCATGCCCGG CGCATATAAA
GAACTCTTCA ACCTTTTAAA GGATGGGGAT TATGAGATTG TTAATTGCCA TGGATTGGAT
TCACCCATAG GCATGATTGC TCTTATTGTC TCCCGAAAAC TTGGAATTCC CGTAGTAGTT
ACCAATCACT CCCTGGTAGG AGATACACCA TATAGTTCGC TTTTATATCT TGCAGGTAAA
TTGCTTCTAA AGAATACCGA CGCTGTAATT GCAGTTAGTT CAGCAGTTGA AAAAGACTCA
AATCTGATGA CAAAAAAACC GATTTACCGT ATTTTCAACG GGGTAGATTC TGAAGATAAA
ATCATCAAAG TCCCTTTCCC TGTTAATACC GAAGGAAAAC TTGTAATCGT CACAGTTGCA
CGCATGACAA GGAAAAAGGG CGTTCAAAAC ATTGTAGATC TAGCCCCTTT ACTTCTGGAA
AAACATAAAA ATTTGCTGTT TGTAATGATA GGAGACGGCC CACTCAGGGA AAAGCTTGAA
AGCACGGTAG AAGAGTCAGG TTTATCCGGA AATTTCTACT TTACAGGGGA AGTATCAAGG
GAAAAAGTGC TGGGATATCT GGAACAGGCA GATATCTTTG CCCTTCCTTC GAGTAATGAA
GCTTTTGGAA TTTCGATTCT GGAGGCAATG TCAAAAGAGG TTCCTGTTGT AGCAATGAAT
AATAGTGGGG TTTCGGATAT TATCAGAAAT GGAGTAAATG GCTATCTTGC AGACAGCCTT
ACAGAATTTT CAGACTATCT TGAGAACCTT ATAGAAAAAC AGGCCCTGCG AACTTCCTTT
TCCAGGAAGG CTTTAAGAGG GCTTTCAAAT TATGACTGGA ACCTGATCTG TAAACAGACA
AGCAAGGTAT ATACAAGTGT CATTTATGAA AAATATCACA ATAACCGTTG A
 
Protein sequence
MEKHKIAMIS DWYFPKVGGI EYSMHTLAKT LSMHGYEVSV ITRSYPGVPE YSKRDGVSVI 
RLKGRPLPGQ SRFLMPGAYK ELFNLLKDGD YEIVNCHGLD SPIGMIALIV SRKLGIPVVV
TNHSLVGDTP YSSLLYLAGK LLLKNTDAVI AVSSAVEKDS NLMTKKPIYR IFNGVDSEDK
IIKVPFPVNT EGKLVIVTVA RMTRKKGVQN IVDLAPLLLE KHKNLLFVMI GDGPLREKLE
STVEESGLSG NFYFTGEVSR EKVLGYLEQA DIFALPSSNE AFGISILEAM SKEVPVVAMN
NSGVSDIIRN GVNGYLADSL TEFSDYLENL IEKQALRTSF SRKALRGLSN YDWNLICKQT
SKVYTSVIYE KYHNNR