Gene Mbar_A1720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1720 
Symbol 
ID3626759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2113699 
End bp2114040 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content40% 
IMG OID637700599 
Product4-carboxymuconolactone decarboxylase 
Protein accessionYP_305242 
Protein GI73669227 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.8171 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTTT TGGATGAAAT GTTACCTGAA ACTGCGGAAG CTTTTGGACA AATGAGAAAT 
TCCATATTCA AAGATGGTTA TCTGGATCTT AAAACCAAAG AACTTATAGC CATTGCCTCC
TCTGTCCTTA TGCGTTGTCA GTTTTGCGTT GATACACATT CGCAAAGAGC GATTGCTGCA
GGAGCTACAA AGGAGGAAAT TGCCGAAACG ATTTCAGTCG CTATGTTTGT TGCTGCAGGC
ACACAGATAG GGTGGACAAA CATATACAGG GAAAATATAT ACGACAAAAT CTTTGAAAAG
GATAAGAGAG AAGAAGACTG TTGTTGCTGC TGTAAGGACT AA
 
Protein sequence
MSFLDEMLPE TAEAFGQMRN SIFKDGYLDL KTKELIAIAS SVLMRCQFCV DTHSQRAIAA 
GATKEEIAET ISVAMFVAAG TQIGWTNIYR ENIYDKIFEK DKREEDCCCC CKD