Gene Mbar_A1706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1706 
Symbol 
ID3627387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2104442 
End bp2104834 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content37% 
IMG OID637700585 
Productuniversal stress protein 
Protein accessionYP_305228 
Protein GI73669213 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0360451 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTTG CAAAACTTAT GGGTGCGAAG GTCTATGCTC TTTATGTGTT TAATAAAAAT 
GCATATGTAC CACCTGTACT GGAAACACCG ATTCATCTGG GTTCTAATTG GAATGTCACG
GAGGAAATGT TGCATAAAGA AGGAGATAAT GCTATCCAAT ATGCTAAGAA AGTTGCAAAG
GATAAGGAAA TAGACTATGA AGGTGTAGTT GTAGAAGGTG ATCCTGCTAG TGCAATTCTG
GAGTTTGCAG AGCAATACAA AGCAGATATT ATAATAATGG GAACCCTTGG TAAAGGAGGA
TTAGAAAGAT TTTTGCTTGG GAGTGTAACA GATAAGGTTG TAAGGCACTC AAAGGTTCCA
GTTCTTGTTG TTAAGAAACA AAAGCAGAAT TAA
 
Protein sequence
MELAKLMGAK VYALYVFNKN AYVPPVLETP IHLGSNWNVT EEMLHKEGDN AIQYAKKVAK 
DKEIDYEGVV VEGDPASAIL EFAEQYKADI IIMGTLGKGG LERFLLGSVT DKVVRHSKVP
VLVVKKQKQN