| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1692 |
|---|
| Symbol | ubiA |
|---|
| ID | 3625490 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 2089437 |
|---|
| End bp | 2090330 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637700571 |
|---|
| Product | prenyltransferase |
|---|
| Protein accession | YP_305214 |
|---|
| Protein GI | 73669199 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.311818 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAGAAA CCCTGAAAGC TTATCTTGAC CTTATACGTG CTCATTTTCT TCCTGCCTGG
CCTCTTGTTT CCTGCTCTGG GCTAGTGCTT GCTTTTGCAA ATTATGGCGG CTTTTCCTGG
GCGTTGACTA TTAAGGTGGC TTTAATTGGG CTGCTTGGGT TTGAAGCTGG TTTTATACTT
AATGATTATG TGGATAGAAA GAGAGATCGG CTTGATGTAG AAAACACGCT TACAAGGTAC
TGGAGGCCTT TTAAAGAGAG ACCTATACCT TCAGGAAAAG TTTCTTCAAA AAATGCCTTT
TTGTTATTTA TCCTGCTTGT AGCAGTCGTT TCAGCCTTGA TTCTTACACT TCCTTATCCA
AACTCTTTAT ACGTGTTTGT AGTTATGCTG TACTCTTACA GCATTGAGGC TTTTTACCAG
ATAAAAAAGA GAAATCAGAA CTATCCAATT GCACAGCTTT TGGGCAGGAC GGATTTTACG
CTTTTTCCGG CGGCAGGTTA TCTATGCTAC GGTCATCCAG ACATGACCAT GTTGCTCTAC
ATGTTTTTTT TCTATCCCTG GACAATGGCG CATTTGGGAT TGAATGACTT TATAGACCTG
AAAAACGATC GCTCAAGAGA CATGAAGTCA ATAGCTGTAC TCTACGGTGA AAAAGGGACA
ATGTACTGGA TTACAGGTTT TACGGCCCTG CATTTCCTTG CAGCTATTTT CTTTCTCCAA
GAGCTTGGGG AGATCGCTTT TTACGGTTTT CTTGTGGGTT TTGTGCTCCT TGCAGGGGCA
AACCTTTACC TGTGGAAAGA AAAAAATCCG GGTGCCGGAA TGAAGATACT GCCTGTTTAT
CACGGAGTTC TAATAATCTA CGCAGTGTCG ATTATTCTTG ACTTTATATA TTGA
|
|---|
| Protein sequence | MIETLKAYLD LIRAHFLPAW PLVSCSGLVL AFANYGGFSW ALTIKVALIG LLGFEAGFIL
NDYVDRKRDR LDVENTLTRY WRPFKERPIP SGKVSSKNAF LLFILLVAVV SALILTLPYP
NSLYVFVVML YSYSIEAFYQ IKKRNQNYPI AQLLGRTDFT LFPAAGYLCY GHPDMTMLLY
MFFFYPWTMA HLGLNDFIDL KNDRSRDMKS IAVLYGEKGT MYWITGFTAL HFLAAIFFLQ
ELGEIAFYGF LVGFVLLAGA NLYLWKEKNP GAGMKILPVY HGVLIIYAVS IILDFIY
|
|---|
| |