Gene Mbar_A1689 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1689 
Symbol 
ID3625487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2086607 
End bp2087314 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content44% 
IMG OID637700568 
Producthypothetical protein 
Protein accessionYP_305211 
Protein GI73669196 
COG category[S] Function unknown 
COG ID[COG4997] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.209957 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTAA ATAATTCAAA AGCAGTTAGG GACTTTATAC CTGAAATTTT CAAACTTTCA 
GGCAAGGAAT GCATGATCCG TGAGCTTTCA GACTCCAGTT TTCTTCCTGA ACTTGAAAAT
AAGCTCGAAG AGGAACTGAA GGAGTATCTT GAAAGTAAAA AGCTTGAAGA GCTTGCAGAC
CTGCTTGAGG TAATTTACAG AATCGCGGAA CTGAGAGGCT CTTCAAAAGC TGAACTTGAG
ACAATAAGGC AGCGGAAAAA ACATGAAAAG GGCGGATTTG AGAAAAATCT TCTCCTTCTT
AATTCGCTTG AAGAAAGCTC TCATACGGGG TTACGTGCTG GCTCTACCGA ATCCATGCGT
GTGGTTTTCA AGCCTGAGGA TGCGGCAGTA ATTGAGAAAA AAGGAGTGAA GATGAGAATC
TACACCACTA AAGCCGAATC CGGAAATGCC GGTGTACTCT ATCAGGAAAC ACAGAAAGGG
CACACAGAGG AGTTCCTGCA TGAAAAAAGC GATTTTATTT ATTATATCCT TGAAGGCAGG
GGGGTTTGGA TAGTTGAGGA TAAAGAATTT GAGGCCCAAG CTGGAGACGT AGTTGTCGTG
CCTGCAGGAA AAAGGTTCTG GTTCCGTGGA AATCTCAAGC AGGTCTGCAT AACTGCTCCG
GCCTGGGAAG AACAGTACGA GCGCCACATA AGAGATCTTG AATTGTAA
 
Protein sequence
MAVNNSKAVR DFIPEIFKLS GKECMIRELS DSSFLPELEN KLEEELKEYL ESKKLEELAD 
LLEVIYRIAE LRGSSKAELE TIRQRKKHEK GGFEKNLLLL NSLEESSHTG LRAGSTESMR
VVFKPEDAAV IEKKGVKMRI YTTKAESGNA GVLYQETQKG HTEEFLHEKS DFIYYILEGR
GVWIVEDKEF EAQAGDVVVV PAGKRFWFRG NLKQVCITAP AWEEQYERHI RDLEL