Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1685 |
Symbol | |
ID | 3625483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 2080385 |
End bp | 2080924 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637700564 |
Product | phosphinothricin acetyltransferase |
Protein accession | YP_305207 |
Protein GI | 73669192 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1247] Sortase and related acyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0590147 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0881211 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGAAA GAGATAAGCC CAAATCCCTT ATAATAAGAG AGGCTACGCC GCAAGATACT CAGGAAATGC TTGAAATCTT TAATTACTAT ATAGATAATA GTTTTGCAGC CTACCTCGAA ATTCCTGTTG GTCCGGAATT TTTCAAGACC TCCAACGACG AGGGCGAATC GAACAAAAGT GAGCCTTACC CTTTTTACGT AATGGAAGAA GATAACAGAG TGATTGGTCT CGGAGCCCTC AGGCCGTATT TACCGTTTCC TAATTTTCAG CACACCGGAG TACTCTCATA TTTTATCCTG CCAGAATACA CAAGAAAAGG CCAGGGAACA AAACTGCTGG ATTTTCTGTG TCAGGAAGCT AAAAAGAAGA ATATGAAAAG TCTCCTTGCA AACGTCTCCT CGAAAAACCA GGCCAGTCTG AATTTCCATC TTAAACATGG ATTTGTAGAA TGCGGCAGGT TTAAAGACGC AGGAACGAAG TTCGGAAAAT ATTTTGATAT TGTGTGGTTT CAGAAGTTTC TGGGAGAAAG CCCGGAATAA
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Protein sequence | MQERDKPKSL IIREATPQDT QEMLEIFNYY IDNSFAAYLE IPVGPEFFKT SNDEGESNKS EPYPFYVMEE DNRVIGLGAL RPYLPFPNFQ HTGVLSYFIL PEYTRKGQGT KLLDFLCQEA KKKNMKSLLA NVSSKNQASL NFHLKHGFVE CGRFKDAGTK FGKYFDIVWF QKFLGESPE
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