Gene Mbar_A1685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1685 
Symbol 
ID3625483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2080385 
End bp2080924 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content41% 
IMG OID637700564 
Productphosphinothricin acetyltransferase 
Protein accessionYP_305207 
Protein GI73669192 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0590147 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0881211 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGAAA GAGATAAGCC CAAATCCCTT ATAATAAGAG AGGCTACGCC GCAAGATACT 
CAGGAAATGC TTGAAATCTT TAATTACTAT ATAGATAATA GTTTTGCAGC CTACCTCGAA
ATTCCTGTTG GTCCGGAATT TTTCAAGACC TCCAACGACG AGGGCGAATC GAACAAAAGT
GAGCCTTACC CTTTTTACGT AATGGAAGAA GATAACAGAG TGATTGGTCT CGGAGCCCTC
AGGCCGTATT TACCGTTTCC TAATTTTCAG CACACCGGAG TACTCTCATA TTTTATCCTG
CCAGAATACA CAAGAAAAGG CCAGGGAACA AAACTGCTGG ATTTTCTGTG TCAGGAAGCT
AAAAAGAAGA ATATGAAAAG TCTCCTTGCA AACGTCTCCT CGAAAAACCA GGCCAGTCTG
AATTTCCATC TTAAACATGG ATTTGTAGAA TGCGGCAGGT TTAAAGACGC AGGAACGAAG
TTCGGAAAAT ATTTTGATAT TGTGTGGTTT CAGAAGTTTC TGGGAGAAAG CCCGGAATAA
 
Protein sequence
MQERDKPKSL IIREATPQDT QEMLEIFNYY IDNSFAAYLE IPVGPEFFKT SNDEGESNKS 
EPYPFYVMEE DNRVIGLGAL RPYLPFPNFQ HTGVLSYFIL PEYTRKGQGT KLLDFLCQEA
KKKNMKSLLA NVSSKNQASL NFHLKHGFVE CGRFKDAGTK FGKYFDIVWF QKFLGESPE