Gene Mbar_A1683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1683 
Symbol 
ID3625481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2075755 
End bp2076681 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content47% 
IMG OID637700562 
ProductNADPH:quinone reductase 
Protein accessionYP_305205 
Protein GI73669190 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.169179 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAGCGA TAAGGATTCA TGATTTTGGG GAGCCCGACG TTCTAAAATA TGAGGATATT 
CCTGAGTCTC AACCAGGTCC GGGTGAAGTT CGGATTAGAG CTATTGCAGC CGGAGTCAAC
CCAATAGATT GGAAGATACG TAGAGGCTAT ATGGAACTGC CCTTGCCGAT GACTATGGGA
TCGGATGTTG CAGGTGTTGT GGATGCGATA GGGCAAGGTG TTGATTCCTT CCAGCCTGAA
GACGAAGTTT TTGGTAAAGC ATCTGCAGGG CAGGGGGGAT ATGCTGAATA TATAGTTGTC
AATTCTACAC AGATAGCTCA AAAACCCAAA AGTATCGGAT TTATTGAAAG TGCTGCTATT
CCAACTGCTG GCCTGGCTGC CTGGCAGTCA CTTTTCGATA TTGCCGGACT CGAAAAAGGG
CAATCAGTGC TCATTCATGG TGCTTCTGGA GGAGTTGGAA CTTTTGCAGT CCAGTTCGCC
AAATGGAAAG GGGCATACGT TATAGGTACC GCGTCGAGTA AAAATGCAGA ATTCTTGAAA
AGCATAGGTT GCGATGAAGT AATTGACTAT AGGAACCAGC AGTTTGAGGA GATTGTGAGT
AATCTTGACG TAGTACTTGA TACGATTGGG GGAGACACGT TCGAAAGATC CTGGGGCGTG
TTAAAACCCG GAGGATTCCT GGTGACAACT GTAGCCAGCA TTCCCGAAGG AACACCACAA
AAACACGGAG TGCGGGCAGA AAGGCTCATT ACCCAGGCTG ACGGAAAAGA ACTCGCTCAA
ATAGCAGCTA TAATAGACGA AAGAAAAATC AAGCCTATTG TAACGACCGT GCTTCCTTTG
GCCGATGCAC AAAAAGCGCA TGAAATGAGT GAAAGCGGAC ATACTCGCGG AAAGATTGTA
CTGCGCATTG CAGAGGACCC GAAGTAA
 
Protein sequence
MKAIRIHDFG EPDVLKYEDI PESQPGPGEV RIRAIAAGVN PIDWKIRRGY MELPLPMTMG 
SDVAGVVDAI GQGVDSFQPE DEVFGKASAG QGGYAEYIVV NSTQIAQKPK SIGFIESAAI
PTAGLAAWQS LFDIAGLEKG QSVLIHGASG GVGTFAVQFA KWKGAYVIGT ASSKNAEFLK
SIGCDEVIDY RNQQFEEIVS NLDVVLDTIG GDTFERSWGV LKPGGFLVTT VASIPEGTPQ
KHGVRAERLI TQADGKELAQ IAAIIDERKI KPIVTTVLPL ADAQKAHEMS ESGHTRGKIV
LRIAEDPK