| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1679 |
|---|
| Symbol | |
|---|
| ID | 3625477 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 2073028 |
|---|
| End bp | 2073450 |
|---|
| Gene Length | 423 bp |
|---|
| Protein Length | 140 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637700558 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_305201 |
|---|
| Protein GI | 73669186 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5513] Predicted secreted protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.213144 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAAAT TTGTACATGG GATAACAGTT TTGATTGCAT GTTTAGTTCT GGCAACGCTT
CCAGCGGCTG TATGTGCTAA ACCAGACATA GAAAGTCAAA ATAAGATGAT AACCGAAAGT
GACAACGGAA ATACCATATA TATTAAAGAA GGACACGCTT TTTTCCTGAA GCTTAAAGAA
AATCCGAGCA CAGGTTATTC CTGGCAACTC AGGCTAAGTA ACGGACTAAA CCAGCTCTCG
GACAAATACC ACCCCTTCGA ATCTTCGGAA AATAATTTTG TTATTGGTGC CGGTGGGTTC
CGTTTATGGA GAATTGAAGG TGTAGCTAAA GGCAATCAAC AGGTAAACGC AATATACAAA
AGATCCTGGG AGCCAGAAAC AGGCCAGGAA CAGAATTTCA AACTTAATAT TGTAGTGGTC
TAA
|
|---|
| Protein sequence | MSKFVHGITV LIACLVLATL PAAVCAKPDI ESQNKMITES DNGNTIYIKE GHAFFLKLKE
NPSTGYSWQL RLSNGLNQLS DKYHPFESSE NNFVIGAGGF RLWRIEGVAK GNQQVNAIYK
RSWEPETGQE QNFKLNIVVV
|
|---|
| |