| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1667 |
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| Symbol | lysS |
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| ID | 3626902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 2057553 |
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| End bp | 2059100 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637700548 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_305191 |
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| Protein GI | 73669176 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00462] lysyl-tRNA synthetase-like protein GenX
[TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.208313 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATGG AAATTAACAA TGAAAAAATG TCAGATAGCC TTGTACCGTC TGACAATGAA
TCTGACAATA ATGATATTTC AGATAGCAGG GTCTTTGATG ATTCTAAACT TGCAAAACTA
AACGGCATCA AAAGCCAGGG ACTTAATCCG TACCCCTATA AATTTGAAAA GAATGGGGAT
ATCTGTGATA TCCAGAAAAA GTTCGAGGAC TTTGAAAAGA ATGAAGGGCT AACGGTTAGA
ACCGCAGGAA GGCTTTACAA TATTCGCAGG CTTGGAAAAA TGATATTTGC CGATCTTGGA
GACCAGGGGG GCAGAATTCA GGTTACTTTA AGGAAAGGAA ATCTTCCTGA TGAGGATTTC
AAGACTTTTA AAACCCTGGT AGATTCAGGA GATATCGTAG GTGTTCAGGG CACACTTTTC
AGGACAAAAC GGGGTGAGAA CTCTATCAGC GTGTCCGAAT TCTCCCTTCT CTCAAAATCT
CTCTGTGCCC TTCCCGAAAA ATTCCACGGC TTAAAAGACG TTGAAACCAG GTACAGAAAA
AGGTATCTTG ACCTTATAGT CAATGCTGAT AAGAGAGAGA TTTTCGTCAT GAGGAGCAAA
CTCATCTCTG AGATCAGACG ATACCTTTCT GACAGGGAAT TTCTGGAATT TGAAACTCCA
ATACTCCAGA ATGTGTACGG AGGCGCAAAT GCAAGGCCTT TCACGACTTT CCATAACTGT
CTCGGTCAGA AACTCTTCCT TAGAATTGCT CCTGAACTTT ATCTTAAGAG GCTTGTTGTT
GGCGGTTACG AGAAGGTCTT TGAGATCTCC AAGAATTTCA GGAATGAAGA TATCGACACA
ACTCATAACC CTGAGTTCAC CATGATCGAA GTCTATGAAG CTTACAGGGA TTACAATGAC
ATGATGGATT TAACCGAAGG CCTAATTTCG GAACTTGTGT TCAAGCTGAC TGGCAGCTAT
GAAGTTAAAA TTGGCGAAAA CACACTTAAT CTTCATACCC CCTGGAAAAG AATTTCCATG
GAAGATGCCT TAAAAGAATA TGCTGGACTT GATGTTTTTG CACACTCGCT TGAAGAATTG
AAACAAATCG CAATCGAAAA CAGAATCGAG GACTACGAAA AAGCAAAAAC TTACGGAGAG
TTCCTTGCCT TGCTCTTTGA AGGCCTGGTA GAGGACAAGC TGATAAATCC GACTTTCATT
TATGATTTCC CTGTGGAAAA CTCCCCTCTT GCCAAAAATC ACAGGTCAAA AGAAGGCTTT
GTCGAGAGAT TCGAGCTCTT CTTAAATGGC TGGGAATTGG CAAATGGTTA TTCCGAACTG
AACGATCCTA TTGAACAGCA AAAAAGGTTC GAAGAACAGG ACAAGAAAAG AAAGTTAGGA
GACCTTGAAG CCCAGACCAT TGATTACGAT TTCGTAAATG CCCTCGGATA CGGAATGCCC
CCTACAGGCG GCATGGGACT TGGAATCGAC AGGCTTACCA TGATTCTAGC GGGCCTGGAC
TCTATCAAAG AAGTAATCCT TTTCCCACAG ATGAAAAGGG AAGACTGA
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| Protein sequence | MSMEINNEKM SDSLVPSDNE SDNNDISDSR VFDDSKLAKL NGIKSQGLNP YPYKFEKNGD
ICDIQKKFED FEKNEGLTVR TAGRLYNIRR LGKMIFADLG DQGGRIQVTL RKGNLPDEDF
KTFKTLVDSG DIVGVQGTLF RTKRGENSIS VSEFSLLSKS LCALPEKFHG LKDVETRYRK
RYLDLIVNAD KREIFVMRSK LISEIRRYLS DREFLEFETP ILQNVYGGAN ARPFTTFHNC
LGQKLFLRIA PELYLKRLVV GGYEKVFEIS KNFRNEDIDT THNPEFTMIE VYEAYRDYND
MMDLTEGLIS ELVFKLTGSY EVKIGENTLN LHTPWKRISM EDALKEYAGL DVFAHSLEEL
KQIAIENRIE DYEKAKTYGE FLALLFEGLV EDKLINPTFI YDFPVENSPL AKNHRSKEGF
VERFELFLNG WELANGYSEL NDPIEQQKRF EEQDKKRKLG DLEAQTIDYD FVNALGYGMP
PTGGMGLGID RLTMILAGLD SIKEVILFPQ MKRED
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