| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1641 |
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| Symbol | |
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| ID | 3625439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 2023061 |
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| End bp | 2024323 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637700522 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_305166 |
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| Protein GI | 73669151 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTTCAA AGGACCTTCC CTTCACCAAA GAGAAAATTC AGGAAATAAT AAAAAAGTAT
CCCACGCCGT TTCATATATA CGATGAGAAA GCCATTCTGG AAAATGCGGA GAAAATGAAA
GCAGTTTTCA GGGAGGTTCC GGGTTTTAAA GAATTTTTTG CTGTGAAAGC CCTTCCAAAC
CCCTTTATTC TTAAAATCCT GAGAGAAAAG GGCTTTGGTG CGGATTGCAG TTCTTTACCG
GAGTTAATTC TTGCTGAAAA AGCAGGAATT ACCGGAGAAG ACATAATGTT TAGCTCAAAC
GATACTCCTG CTGAAGAGTT CTTAAAGGCA AAAGAGCTTG GAGCATACAT AAATCTTGAT
GACATAAGCC ATATTGACTA CCTTGAGAAA TATGCCGGAC TTCCTGATAT TGTCTGTTTC
AGGTACAATC CTGGCCCTCT TAAAGAGGGA AATGCCATTA TAGGAAGGCC TGAAGAAGCA
AAGTACGGCT TTACGAGAGA CCAGCTTTTT GAAGGCTACC GCATACTCAG GGATAGAGGA
GTAAAGCGTT TCGGAATGCA CACGATGGTG GCCTCGAATG AACTAAAAGC TGATTACTTT
GTGGAAACCG CAAGAATTCT CTTCGAACTT ATAGTTGAAA TCTCAAAAGA ACTCAACATA
AAGTTCGAAT TTGTGAACCT CGGCGGAGGC ATAGGCATCC CCTATAGGCC TGAAGAAGAA
CCTGTTTCCT TCGAAGCCGT GGCAAAAGGT GTCAAAGAAG CTTACGAAGC CACAATCACA
GCTAGCGGGC TTTATCCACT TAAAGTGTTT CTGGAATGCG GCCGTGTAAT TACAGGCCCC
TATGGTTACC TGATTACCCA GGTTCGGCAC CTCAAACACA CCTACAAAGA CTATGTAGGA
ATGGACTCCT GTATGGCCAA CTTGATGCGG CCTGGCATTT ACGGAGCCTA TCACCATATA
ACAGTGCTCG GAAAGGAAAA TGAGGCTCCT GTCCATAAGT ATGATGTCAC CGGCTCCCTA
TGCGAAAATA ATGACAAATT CGCAATCGAC AGGCATCTTC CAGAAATTGA GATAGGAGAT
ATCCTTGCAA TCCACGACAC AGGTGCTCAC GGTCACTCTA TGGGTTTCAA TTACAACGGA
AAACTCCGTT CTGCCGAACT CCTTCTCAGA AAAGACGGAA GCGTTGTGCA GATCAGGAGA
GCCGAGACTA TTGAAGATTA CTTTGCAACC CTGGATTTCG AAGCCCTGAA AGATTTCAAG
TAA
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| Protein sequence | MVSKDLPFTK EKIQEIIKKY PTPFHIYDEK AILENAEKMK AVFREVPGFK EFFAVKALPN
PFILKILREK GFGADCSSLP ELILAEKAGI TGEDIMFSSN DTPAEEFLKA KELGAYINLD
DISHIDYLEK YAGLPDIVCF RYNPGPLKEG NAIIGRPEEA KYGFTRDQLF EGYRILRDRG
VKRFGMHTMV ASNELKADYF VETARILFEL IVEISKELNI KFEFVNLGGG IGIPYRPEEE
PVSFEAVAKG VKEAYEATIT ASGLYPLKVF LECGRVITGP YGYLITQVRH LKHTYKDYVG
MDSCMANLMR PGIYGAYHHI TVLGKENEAP VHKYDVTGSL CENNDKFAID RHLPEIEIGD
ILAIHDTGAH GHSMGFNYNG KLRSAELLLR KDGSVVQIRR AETIEDYFAT LDFEALKDFK
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